Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1306 ATGGATTCCCATTCCCCTGTTCTCACCTCAACGACGTCGTTGTCGTCAATGTCGAAGCGTCCGTGTCCGTCCCAAAACCCTAGAGCGGAGAACCTGGGAGAGGTGGAGCGTCGGCTTGAGGCGTTTCTCTCCCTCTCGGACGTGGCTTCTCTCTCCCTTGATCTCTCCTTCGAGAGGCTCCTCCAATCGGTCCCCTCCGACGCCGACTCCGATCTCATCGATCGCGCCCTCAAAATGGCCTCTCTCCTCCTCGACGCCGCCAAACACTCCTCCCGCAAACGCGCTTCCAACCACAATTCCCTCTCCTGGCCCCTCCCTCCCGACCTCACCATCAAGGTGTTCTCGATGCTTGATACCCAGAGCCTGTGCTATGCTTCGGCTGCTTGTTCACTGTTTAGCAAATGTGCTAAAGATCCTATGTGCTATGCAAATCTTGATTTGACGACGCTGGTTCCGAAGGTTAACAATGCAGTTGTTGCCACGATGGTTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAGCTTGGTGTTGTCCCTGGCGCTACTACTTCACTTGGATCTTGTCCACCATTTGCTTGTACCATCAGAAATGCTATTGTAGAAGTATCTAACTTTTCATGGAATGATAAGAGATCTCGACAAGGGAGAGAGTCATCCATTCTCACAAGATGCTGTTTAAGCCCTTTAAGTGGGGATGGCGGTGCCCCAGGGGCTCTTTTGAGAAAGTTGCACTTGTACAATATCGAGAGAATGGATAATGCATCCCTTGGTGCAGCATTGTCAGCATGCCCTTCTCTCCTTGATTTGGAAATTGTTGGGCTCCATGTTGAGCTGAGGCAAACATTAATGTCAGTTAGTGCAAACTGCCACTTGATAGAGCGTTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCGCAAACCTGTTTTGAGCTGGTAAACAATTGTCCTCATCTAACTTCTTTATCCCTTAGAGGGTTTAAGCTACACGATTGCAAAGTTCGCGTCCTGGTTAAGGGATTTAGGAAACTGAAATATGTTGATTTTTCAACATCCTATTCAATCACTGGTAACTTCTTAAGAAACCTTGGAAGCTGCAATGGTGGGAACTTACTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTCGCTAAGCTACTGACTGCAATTCTTGCAGGAGATTTCAAATTGCTTGTACATCTTGACATATCCAATAGGGAAGGCTTAGCATCTGAGGCTGACTGGTATCACAGGTGCTACAACTCTAGTATTATGCCTATAAAACAGGTTTTGGAAGCAAGACCTGATATGTGTCTGGTGGCTGAATATCCATCAGCAGAAGGAAGTTACATCGAGACATTCGATGCTGATATGAACAGCGAGATAAGTTTGCCATCACAATTGAGCAGCCACACGTCAGATGGATCAATTTTTATGAGTACATCTGAAAGCAGCTACAATAGTGATCAAGGAAGTGGCAATGAGGATGGTCAAGATGCCAACTATGTGATATATGAGGAAAGCTCAGATGAGATTGACTTTTTGTCCCTCTAG 1581 0.4636 MDSHSPVLTSTTSLSSMSKRPCPSQNPRAENLGEVERRLEAFLSLSDVASLSLDLSFERLLQSVPSDADSDLIDRALKMASLLLDAAKHSSRKRASNHNSLSWPLPPDLTIKVFSMLDTQSLCYASAACSLFSKCAKDPMCYANLDLTTLVPKVNNAVVATMVQRAGKALRSLKLGVVPGATTSLGSCPPFACTIRNAIVEVSNFSWNDKRSRQGRESSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLKAQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKEMEVAKLLTAILAGDFKLLVHLDISNREGLASEADWYHRCYNSSIMPIKQVLEARPDMCLVAEYPSAEGSYIETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1306 526 MobiDBLite consensus disorder prediction 1 30 - -
Gso19g1306 526 Gene3D Ribonuclease Inhibitor 97 414 IPR032675 -
Gso19g1306 526 MobiDBLite consensus disorder prediction 1 25 - -
Gso19g1306 526 PANTHER F-BOX SKIP17-LIKE PROTEIN 34 469 - -
Gso19g1306 526 MobiDBLite consensus disorder prediction 488 507 - -
Gso19g1306 526 MobiDBLite consensus disorder prediction 488 506 - -
Gso19g1306 526 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 34 469 - -
Gso19g1306 526 SUPERFAMILY F-box domain 94 150 IPR036047 GO:0005515
Gso19g1306 526 SUPERFAMILY RNI-like 235 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1306 Gso-Chr19 41721063 41728989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1306 K10268 - gmx:100786317 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1306 19 41721063 41728989 Gso3g1305 3 38895736 38903437 GST