Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1302 ATGGCTTCTCACTTCCGCCTTCCGTCTTTCTCTTCTTCTAACCATTTCCTTTTAACATCTTCTTCTTCTTCTTCTTCTATCTCTCTTCACCACTTCTCCAAATCCTCTCTGGGTGCCGTGTCGTCTGAGACTAACGACAAACAAGAGATAAGATGCAGAGCAATATCCAAACCACGAACACAAGAATGTTCAGACATATTTCAGGGTAGTCTAGCAACGTTAAAGTTTCGTGAGATTAATGTGGAAGATGACATAGAAGAGGAGCAAGACATTGGGAAGGCTTTGGTGGCAAATGAGATCAAGAAGAGAGTGGACACTATCAAATCAATATTGGGTTCCATGGAAGATGGAGAGATAACAGTATCTGCTTATGACACTGCTTGGGTTGCTCTGATAGAAGATGTTCATGGAACTGGTGTCCCTCAATTTCCATCGAGTCTAGAATGGATAGCGAAAAATCAACACCCCGATGGTTCATGGGGTGATAAGGAATTATTCTCAGCCCATGATCGGATTATTAACACGTTGGCTTGTGTTATTGCATTAAAAACATGGAATATGCACCCTGAAAAGTGTGAGAAAGGAATGGCATTTTTTAGAGAGAATCTTGGCAAGCTTCAGAACGAGAATGTAGAGCATATGCCAATTGGTTTTGAAGTAGCCTTTCCATCACTTCTTGACATGGCTCGTGGCTTGGACATTGAAGTGCCGAACAATTCCCCAATCCTTAATAAAATCTTCGCAATGAGAAACGTAAAACTCACAAGAATACCAAGAGCTATGAGGCATAAAGTGCCCACAAGTCTCCTTCATAGCTTGGAAGGGATGTCAGGCCTTGACTGGAAAGAACTTCTAAAACTGCAGTCTCAAGACGGGTCTTTCTTGTTTTCTCCGTCATCCACAGCCTTTGCTCTCATGCAAACTAAGGACCAAAATTGCCACAATTACTTGAATAAAGTGGTCAAGAGGTTCAATGGGGGAGTTCCAAACGTGTATCCAGTGGATTTGTTCGAACATATTTGGGTGGTTGATAGGCTTGAACGTCTAGGAATATCTCAGTATTTTCAGCAAGAGATCAAGGACTGTTTGAGTTATGTTTACAGATATTGGACTGAAAAGGGTATTTGTTGGGCAAGAAATTCAAATGTTCAAGACATTGATGACACGGCAATGGGTTTCAGACTATTAAGATTACACGGTTACCAAGTTTCAGCCGATGTGTTCAAGAACTTTGAGAGAAATGGTGAATTTTTCTGCTTTACGGGGCAGACCACACAAGCAGTGACAGGAATGTTTAATCTGTATAGGGCCACACAAATCATGTTCCCGGGAGAGAGAATTCTTGAGCACGGGAAGCACTTCTCTGCCAAATTTTTGAAGGAGAAGAGAGCAGCAAATGAGCTTGTAGATAAATGGATCATAATGAAGAACCTGGCAGAAGAGGTTGCGTATGCTTTGGACGTACCATGGTATGCAAGCCTACCTCGAGTGGAGACAAGATTCTACATTGATCAATACGGCGGTGAGAGTGACGTGTGGATAGGCAAAACCCTTTATAGGATGGCATATGTGAACAACAATAACTATCTCGAGCTTGCTAAATTAGATTACAACAATTGCCAGGCACTGCATCTAATAGAGTGGGGGAGAATTCAAAAGTGGTACTCAGAATCTAGATTGGAGGAGTTTGGAATGAACAGAAGAACGCTTCTATTGGCCTATTTTGTGGCAGCAGCAAGCATATTTGAGCCTGAAAAGTCTCGTGTGAGACTAGCGTGGGCACAAACCAGTATCTTACTTGAGACCATAACATCCTATGTTAGTGATGCAGAAATGAGGAAAGCTTTCATGAAAAAATTCAGTGACTGTCTTAACAGGCGAGACTACTCCATTGGCTGGAGGTTGAACAGGAACAGAACAGGACATGGACTCGCTGAGACTTTGGTTGCCACCATAGATCAAATCTCGTGGGATATACTCGTGTCTCACGGTCATGAAATTGGATATGACATGCATCGCAATTGGGAAAAGTGGCTTTCGAGTTGGCATCGGGAAGGAGACAAATGTAAAGGACAAGCCGAGCTTTTGGCGCAGACAATAAACCTATGTGGCGGGCATTGGATTTCCGAGGATCAAGTGTCGGATCCACTGTATCAGAGTCTCCTTCAACTCACTAACAATCTCTGCAATAAACTTCGTTGCCACCAAAAGGACAAGGAACTTGAGAGCAGCAACAGCGGCACGAATGTAAACAGCATGATCACCCAAGAAGAAGAGTCAAAAATGCAAGAACTCGTGCAATTGGTGCACCAAAAATCTCCAACTGGCATTGATTTCAATATCAAGAATACTTTCCTCACAGTGGCCAAGAGTTTTTACTATACAGCTTTTTGTGATTCAAGGACCGTCAACTTCCATATTGCCAAAGTTCTGTTTGATGAAGTCGTTTAA 2451 0.4247 MASHFRLPSFSSSNHFLLTSSSSSSSISLHHFSKSSLGAVSSETNDKQEIRCRAISKPRTQECSDIFQGSLATLKFREINVEDDIEEEQDIGKALVANEIKKRVDTIKSILGSMEDGEITVSAYDTAWVALIEDVHGTGVPQFPSSLEWIAKNQHPDGSWGDKELFSAHDRIINTLACVIALKTWNMHPEKCEKGMAFFRENLGKLQNENVEHMPIGFEVAFPSLLDMARGLDIEVPNNSPILNKIFAMRNVKLTRIPRAMRHKVPTSLLHSLEGMSGLDWKELLKLQSQDGSFLFSPSSTAFALMQTKDQNCHNYLNKVVKRFNGGVPNVYPVDLFEHIWVVDRLERLGISQYFQQEIKDCLSYVYRYWTEKGICWARNSNVQDIDDTAMGFRLLRLHGYQVSADVFKNFERNGEFFCFTGQTTQAVTGMFNLYRATQIMFPGERILEHGKHFSAKFLKEKRAANELVDKWIIMKNLAEEVAYALDVPWYASLPRVETRFYIDQYGGESDVWIGKTLYRMAYVNNNNYLELAKLDYNNCQALHLIEWGRIQKWYSESRLEEFGMNRRTLLLAYFVAAASIFEPEKSRVRLAWAQTSILLETITSYVSDAEMRKAFMKKFSDCLNRRDYSIGWRLNRNRTGHGLAETLVATIDQISWDILVSHGHEIGYDMHRNWEKWLSSWHREGDKCKGQAELLAQTINLCGGHWISEDQVSDPLYQSLLQLTNNLCNKLRCHQKDKELESSNSGTNVNSMITQEEESKMQELVQLVHQKSPTGIDFNIKNTFLTVAKSFYYTAFCDSRTVNFHIAKVLFDEVV* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1302 816 Pfam Terpene synthase, N-terminal domain 280 486 IPR001906 GO:0010333|GO:0016829
Gso3g1302 816 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 83 812 - -
Gso3g1302 816 Gene3D - 123 335 - -
Gso3g1302 816 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 96 520 - -
Gso3g1302 816 SFLD Terpene Cyclase Like 1 N-term 96 520 - -
Gso3g1302 816 SUPERFAMILY Terpenoid synthases 525 799 IPR008949 -
Gso3g1302 816 Gene3D Farnesyl Diphosphate Synthase 540 816 IPR008949 -
Gso3g1302 816 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 291 511 IPR008930 -
Gso3g1302 816 CDD Terpene_cyclase_plant_C1 331 813 IPR044814 GO:0010333|GO:0016102
Gso3g1302 816 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 83 812 - -
Gso3g1302 816 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 123 306 IPR008930 -
Gso3g1302 816 Pfam Terpene synthase family, metal binding domain 530 689 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso3g1302 816 Gene3D - 106 538 IPR036965 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1302 Gso-Chr3 38851958 38862055 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1302 K04120 - gmx:100808585 1631.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1304 19 41682039 41693229 Gso3g1302 3 38851958 38862055 GST