Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1287 ATGAATGTTTTTTTTTCCTTCATACCCAACGCGATGAACAAGAGCAAGAGCGCAATAACACCAAAGGACTCAGGCGACAACCCCGTGACCCACTTGGATTTTCTCAAGAAATTCAAACGCTTTAACCCTCTCGAGTCTTCTTTAGGAGTACTCGCCTTTTTCTTCGTCGCTTCTCTCTTCATGGCCTCCTTCTTCTACTTGGATTACAAGGGCTTCCGCTCCAGAGGCACCACCATCATTGACTTGGATTTTTCATCTTCTTCTTCTTCTTCTGTTTCTGTTTCTTCTGCTCCGGTTCAGTTTCTGAGCCAAGATGGTGATAAATGTGATGTCTTTGATGGGAATTGGGTTTGGGATGAGACCTATCCCCTTTACCATTCTGCAAACTGTTCTTTCTTGGATCAAGGTTTTCGCTGCTCCGAGAATGGCAGGCCTGATACTTTCTACACCAAGTGGCGATGGCAGCCCAAAGATTGCAACTTGCCCAGATTTGATGCAAAGAATATGTTGGAAAAGCTACGGGACAAGCGACTAGTGTTTGTTGGTGATTCGATTGGAAGGAACCAATGGGAATCACTGCTTTGTATGCTCTCTCCGGCAATTGCAAATAAGGCTAGGGTCTATGAGGTTAATGGGAGCCCAATTACAAAGCATACAGGCTTCTTGGCATTTAAGTTTGAAGATTTCAACTGTACCATTGAATACTACAGATCACCATATCTTGTAGTGCAGGGACGGCCTCCTTCTGGTGCACCTGATGGGGTAAGAATGACTTTGAGAGTGGATCATATGGACTGGATTTCTCATAAGTGGAGAGATGCAGATGTGCTGATTCTCAATGCTGGACATTGGTGGAATTATGAGAAGACTGTCAAAATGGGTTGTTACTTCCAAATAGGGGAGGAAGTGAAGATGAATATGACTACAGAAGACGCATTCAGAAAATCAATAGAGACAGTAGTTGATTGGGTTGCCAATGAAGTAAACATAAACAAAACTTATGTCATTTTCCGAACTTATGCTCCTGTCCATTTCAGGGGTGGTGACTGGAATACTGGTGGTGGTTGTCACTCTGAAACATTACCCGATTTAGGCTCCTTGCCAACAGTATCTGACATCCATTTCAGAACTCTCATTGATGTCTTGTCAGAACGCACAAATAAATCTGAAGTTTTGAATCTGGACTTGCTTAATGTCACCCAAATGTCACAACGCAGAAGAGACGGCCATGCATCTATTTACTATATCGGACCAGACAGCACAGCCTCTATGCAGCGGCAAGACTGTAGCCATTGGTGCCTACCTGGTGTTCCTGATTCATGGAACGAGATTCTTTATGCACTTCTTCTCAAGTGGGAGGATTTTTTTGAATGGAGACAGAATGCAACAAAAATTTCTCAAGTTTCACCATAA 1413 0.4331 MNVFFSFIPNAMNKSKSAITPKDSGDNPVTHLDFLKKFKRFNPLESSLGVLAFFFVASLFMASFFYLDYKGFRSRGTTIIDLDFSSSSSSSVSVSSAPVQFLSQDGDKCDVFDGNWVWDETYPLYHSANCSFLDQGFRCSENGRPDTFYTKWRWQPKDCNLPRFDAKNMLEKLRDKRLVFVGDSIGRNQWESLLCMLSPAIANKARVYEVNGSPITKHTGFLAFKFEDFNCTIEYYRSPYLVVQGRPPSGAPDGVRMTLRVDHMDWISHKWRDADVLILNAGHWWNYEKTVKMGCYFQIGEEVKMNMTTEDAFRKSIETVVDWVANEVNINKTYVIFRTYAPVHFRGGDWNTGGGCHSETLPDLGSLPTVSDIHFRTLIDVLSERTNKSEVLNLDLLNVTQMSQRRRDGHASIYYIGPDSTASMQRQDCSHWCLPGVPDSWNEILYALLLKWEDFFEWRQNATKISQVSP* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1287 470 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 33 457 - -
Gso3g1287 470 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 33 457 IPR029962 GO:0016413
Gso3g1287 470 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 161 447 IPR026057 GO:0016740
Gso3g1287 470 Pfam PMR5 N terminal Domain 108 160 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1287 Gso-Chr3 38607541 38612425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1287 - - gmx:100801125 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1288 19 41455416 41459991 Gso3g1287 3 38607541 38612425 GST