Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1288 ATGAGCAAGAGCGTAACAGCAACAAAGGACTCAGGCGACAACACCGCGACCCACTTGAATTTTTTCGAGAAATTTAAACGCTTTAACCCTCTCGAGTCTTCCTTGGGAGTACTAGCCTTCTTCTTCGTCGCTTCTCTCTTCATTGCCAGCTTCTTCTACTTGGATTACAAAGGCTTCCGCTCCAGGGGCACTGCCACTGTCCTTCACTTGGATTTCTCATCACCATCTTCTTCTGCCCCAGTTCAGTTTCTGAGCCAAGACGGTGATAAATGTGATGTCTTTGATGGGAAATGGGTTTGGGATGAGACTTACCCCCTTTACCATTCCGCAAATTGTTCCTTCCCGGATCAAGGTTTTCGCTGCTCCCAGAATGGCAGGCCTGACACTTTCTACACCAAATGGAGGTGGCAACCCAAAGATTGCAACTTGCCCAGATTTGATGCAAGGAAGATGTTGGAAAAGCTGCGGGACAAGCGACTAGTTTTTGTTGGAGATTCGATTGGTAGGAACCAATGGGAATCACTCATTTGTATGCTCTCTTCGGCAATTGCAAATAAGGCTAGGGTCTACGAGGTTAATGGGAGCCAAATTACAAGGCACATGGGCTTCTTGGCATTTAAGTTTGAAGATTTCAACTGTACCATTGAATACTACAGATCACGATTTCTTGTAGTGCAGGGACGACCTCCTTTTGGAGCACCTGATGGGGTAAGAATGACTTTGAGAGTGGATCATATGGACTGGATTTCTAATAAGTGGAGAGATGCAGATGTGCTGGTTCTCAATGCTGGACATTGGTGGAACTTTCAGAAGACTGTCAGAATGGGTTGTTACTTCCAAATAGGGGAGGAAGTGAAGATGAATATGACAATAGAAGACGCATTCAGAAAATCAATAGAGACTGTAGTTGATTGGATTGCCAATAAAGTAGACATGAACAAAACTTATGTCCTTTTTCGAACTTATTCCCCTGTCCATTTCAGGGGTGGTAACTGGAATACTGGTGGTGGTTGTCACTTGGAAACATTACCTGATTTAGGCTCCTTGCCACCAGTATCTGACATCCATTTCAGAAATGTCGTTGATATCTTGTCAGAACGCATGAATAAATCAGAAGTTTTGAATCTGGACTTGCTTAATGTCACGCAAATGTCAATACATAGAAGAGATGGCCATCCATCTATTTACTATCTTGGACCAGGCAGGACATCCTCTATGTGGCGGCAAGACTGTAGTCATTGGTGCCTACCTGGCGTTCCTGATTCATGGAACGAAATTCTTTATGCACTTCTTCTCAAGCGGGAGGATTTTTTCGAACGGAGACAGCATACAACAAAAGTTTCTCAAGTTCCACTATAA 1359 0.4393 MSKSVTATKDSGDNTATHLNFFEKFKRFNPLESSLGVLAFFFVASLFIASFFYLDYKGFRSRGTATVLHLDFSSPSSSAPVQFLSQDGDKCDVFDGKWVWDETYPLYHSANCSFPDQGFRCSQNGRPDTFYTKWRWQPKDCNLPRFDARKMLEKLRDKRLVFVGDSIGRNQWESLICMLSSAIANKARVYEVNGSQITRHMGFLAFKFEDFNCTIEYYRSRFLVVQGRPPFGAPDGVRMTLRVDHMDWISNKWRDADVLVLNAGHWWNFQKTVRMGCYFQIGEEVKMNMTIEDAFRKSIETVVDWIANKVDMNKTYVLFRTYSPVHFRGGNWNTGGGCHLETLPDLGSLPPVSDIHFRNVVDILSERMNKSEVLNLDLLNVTQMSIHRRDGHPSIYYLGPGRTSSMWRQDCSHWCLPGVPDSWNEILYALLLKREDFFERRQHTTKVSQVPL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1288 452 Pfam PMR5 N terminal Domain 90 142 IPR025846 -
Gso19g1288 452 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 20 439 - -
Gso19g1288 452 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 143 429 IPR026057 GO:0016740
Gso19g1288 452 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 20 439 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1288 Gso-Chr19 41455416 41459991 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1288 - - gmx:112997611 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1288 19 41455416 41459991 Gso3g1287 3 38607541 38612425 GST