Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1282 ATGCCTCCTCCTCTTCCATCTCTCTGCAACTTCAACTTGGCGATACTCTTCCTCTTCCTCACACCCACTTTCCAAATCCCCCTCATAGCCCCAATCTCAAAAGACGACACCACCCAACTCTACACTCTCTCCGTGTTCCTGAAAACCCCACTCCAACCCACAAAACTCCACCTCCACCTTGGCTCCTCCCTCAGCTGGGTCCTCTGCGACTCCACCTACACCTCCTCCTCCTCCCACCACATCCCCTGCAACACCCCTCTCTGCAACTCCTTCCCCTCCAACGCATGCTCCAACAACTCCTCCCTCTGCGCCCTCTTCCCCGAAAACCCCGTCACAAGAAACACCCTCCTGGACACCGCCCTCATCGATTCCCTCGCTCTTCCCACCTACGACGCTTCCTCCTCTCTCGTCCTCATCTCCGACTTCATCTTCTCCTGCGCCACGGCCCATCTTCTCCAGGGCCTCGCCGCCAATGCATTGGGCCTCGCCTCATTGGGCCGGTCCAACTACTCCCTCCCGGCCCAAATCAGCACTTCATTAACCTCACCTCGTTCTTTCACTCTCTGCCTGCCAGCTTCATCAGCCAACACAGGGGCAGCTATATTCGCCTCCACTGCCTCCTCATTTCTTTTCTCTTCCAAAATTGACCTTACTTACACACAACTCATCGTAAACCCCGTTGCCGACACCGTCGTCACCGACAATCCACAACCGTCTGATGAGTATTTCATAAACTTAACCTCAATCAAAATCAACGGTAAGCCTCTTTATATCAACTCCTCCATCCTCACCGTTGATCAGACCGGCTTCGGTGGGACCAAGATAAGCACTGCGGAACCCTACACTGTTTTAGAAACTTCTATTTACAGACTATTTGTTCAGCGTTTTGTGAACGAGTCCTCTGCTTTTAACTTGACGGTGACGGAAGCAGTTGAGCCGTTTGGCGTGTGCTACCCTGCGGGGGATCTCACGGAGACACGAGTTGGACCCGCGGTGCCCACCGTTGATCTGGTGATGCACAGCGAGGACGTGTTCTGGAGAATCTTTGGCGGGAATTCGATGGTGAGGGTTGCGAAGGGAGGAGTGGATGTGTGGTGTTTGGGTTTTGTGGACGGTGGGACCCGCGGGAGAACTCCCATTGTAATCGGAGGGCATCAGTTGGAGGATAATTTAATGCAGTTTGATCTTGACTCAAATAGATTCGGTTTCACTTCGACTCTCTTGCTTCAGGATGCCAAATGTTCTAATCTCAAGGTCAATAATTTTGCAAATGGAATTAAATAA 1284 0.5226 MPPPLPSLCNFNLAILFLFLTPTFQIPLIAPISKDDTTQLYTLSVFLKTPLQPTKLHLHLGSSLSWVLCDSTYTSSSSHHIPCNTPLCNSFPSNACSNNSSLCALFPENPVTRNTLLDTALIDSLALPTYDASSSLVLISDFIFSCATAHLLQGLAANALGLASLGRSNYSLPAQISTSLTSPRSFTLCLPASSANTGAAIFASTASSFLFSSKIDLTYTQLIVNPVADTVVTDNPQPSDEYFINLTSIKINGKPLYINSSILTVDQTGFGGTKISTAEPYTVLETSIYRLFVQRFVNESSAFNLTVTEAVEPFGVCYPAGDLTETRVGPAVPTVDLVMHSEDVFWRIFGGNSMVRVAKGGVDVWCLGFVDGGTRGRTPIVIGGHQLEDNLMQFDLDSNRFGFTSTLLLQDAKCSNLKVNNFANGIK* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1282 427 PANTHER ASPARTYL PROTEASE-RELATED 14 418 IPR001461 GO:0004190|GO:0006508
Gso3g1282 427 Pfam Xylanase inhibitor C-terminal 241 404 IPR032799 -
Gso3g1282 427 Pfam Xylanase inhibitor N-terminal 41 202 IPR032861 -
Gso3g1282 427 Gene3D Acid Proteases 207 421 IPR021109 -
Gso3g1282 427 ProSiteProfiles Peptidase family A1 domain profile. 41 404 IPR033121 -
Gso3g1282 427 PANTHER OS05G0403000 PROTEIN 14 418 - -
Gso3g1282 427 SUPERFAMILY Acid proteases 34 408 IPR021109 -
Gso3g1282 427 Gene3D Acid Proteases 23 203 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1282 Gso-Chr3 38566436 38568040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1282 - - gmx:100800584 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1282 3 38566436 38568040 Gso2g1229 2 15296077 15297742 PCT
Gso2g1229 2 15296077 15297742 Gso3g1282 3 38566436 38568040 PCT