Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1266 ATGCTTAAATTCCTCAACAAGAACCTTCGCCGCCTCAGCTCCCACCTCCGCTGGCCACCACGACATCGTTCCAAGCCCACTCCCAAACCTCCTCCTCCTCCTCCCAAACCAATACGAATCGCAACGTTCAACGCCGCATTCTTCTCCATGGCACCGGTGCTTCCCGAAGCAGACGGAAAAACAACCACCGCCACCACCACCACTTCAGACGACAACAACAACATAGGACGACCACGAAGCATTCTGAAACAGTCCAAGTCTCCGCTGCTGGGGAAGTCGTCGAAGCTGAGAGTGTCCATCAACTTACCCGACAACGAGATTTCGCTGCGCCAAACGAGCTTCTCGGAGCATGAGAGATCGAAATTAGGCTCCTTCGCCGAGGGAAGAATCGAAGAAGGAGGAAAAGAGAGGCAGAGAAGAACGGTGGTTGAAGTTCTGAGAGAGCTAAACGCCGACGTTTTGGGGTTGCAAGACGTGAAAGCGGAGGAAGAGAACGGGATGAAGCCTTTGTCGGATTTGGCGAGTGCTCTGGGAATGAACTACGTCTTCGCTGAAAGCTGGGCTCCTCAATACGGCAACGCCGTTTTGTCTAAGTGGCCCATTAAACGCTGGAAGCTACAGAAAATCTTTGATCACCACGATTACAGGAATGTTCTGAAGGCCACTATCGATGTACCCCAAGAAGGTGAACTCCACTTTTACTGCACCCACCTTGATTATCTTGATGAGAATTGGAGAATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAGCCACACATTTTAGCTGGAGGCCTTAATTCGCTTGATGAAACAGATTATTCCCAAGACAGATGGACAGATATTGTAAAGTACTATGAAGAGATGGGAAAGCCAACACCGAAGGTTGAAGTTATGAAACATCTCAAGAGCAGACACTACACGGATGCTAAGGATTTTTCAGGGGAATGTGAGTCTGTTGTCATGATTGCCAAAGGACAAAGTGTACAAGGGACATGTAAGTATGGAACTAGGGTTGATTACATATTTTCTTCCTCAGATTCTCCATATAAATTCGTTTCTGGATCCTACTTAGTCCTATCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTAAAAGTAAATAGTAATCCTCAGGAAAATCTGACAAAGAAGCAGGGACAACGAAGACAGAAAGTTGTAAGAATAAAATCAACTCCATCGAAATGTATATGGAAAACACACAATGGAGATATAGATTGA 1257 0.4574 MLKFLNKNLRRLSSHLRWPPRHRSKPTPKPPPPPPKPIRIATFNAAFFSMAPVLPEADGKTTTATTTTSDDNNNIGRPRSILKQSKSPLLGKSSKLRVSINLPDNEISLRQTSFSEHERSKLGSFAEGRIEEGGKERQRRTVVEVLRELNADVLGLQDVKAEEENGMKPLSDLASALGMNYVFAESWAPQYGNAVLSKWPIKRWKLQKIFDHHDYRNVLKATIDVPQEGELHFYCTHLDYLDENWRMKQINAIIQSNDEPHILAGGLNSLDETDYSQDRWTDIVKYYEEMGKPTPKVEVMKHLKSRHYTDAKDFSGECESVVMIAKGQSVQGTCKYGTRVDYIFSSSDSPYKFVSGSYLVLSSKGTSDHHIVKVDVVKVNSNPQENLTKKQGQRRQKVVRIKSTPSKCIWKTHNGDID* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1266 418 MobiDBLite consensus disorder prediction 57 86 - -
Gso3g1266 418 Pfam Endonuclease/Exonuclease/phosphatase family 134 369 IPR005135 GO:0003824
Gso3g1266 418 Gene3D Endonuclease/exonuclease/phosphatase 125 378 IPR036691 -
Gso3g1266 418 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE, PGAP2-INTERACTING PROTEIN-RELATED 3 411 - -
Gso3g1266 418 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 3 411 - -
Gso3g1266 418 MobiDBLite consensus disorder prediction 14 37 - -
Gso3g1266 418 SUPERFAMILY DNase I-like 34 376 IPR036691 -
Gso3g1266 418 MobiDBLite consensus disorder prediction 59 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1266 Gso-Chr3 38350476 38353925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1266 - - gmx:100794761 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1267 19 41213334 41216964 Gso3g1266 3 38350476 38353925 GST
Gso3g1266 3 38350476 38353925 Gso2g1247 2 15509264 15513385 PCT
Gso3g1266 3 38350476 38353925 Gso10g0206 10 2130903 2135228 PCT
Gso2g1247 2 15509264 15513385 Gso3g1266 3 38350476 38353925 PCT
Gso10g0206 10 2130903 2135228 Gso3g1266 3 38350476 38353925 PCT