Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1267 ATGCTTAAACTCCTCAACAATAACCTCCGTCGCCTCAGCTCCCACCTCCGCTGGTCCTCACGGCGTCGTTTTAAGCCCAAGCTACGCTTCACCAAGCCCACTCTCGAACCTCACACCGAACCTTCTCCTCCTCCAACGAAACCAATACGAATCGCAACGTTCAACGCCGCATTCTTCTCCATGGCACCGGTGCTTCCCGAAGCAGACGACAAAACCACCACCTCCTCGGACGACAACATAGGACGAGCGAAGTCACCCTACGATCGACCGCGGAGCATTCTGAAACAGTCGCAGCCTCCTTTGCTGGGGAAGTCAAAGCTGAGAGTGTCCATCAACTTACCCGACAACGAGATTTCGCTGCGCCAAACGAGCTTCTCCGAACACGAGAGATCGAAATTAGGGTCGTTGTCGTGGTCGTGGAGTTTCGCCGAGGGAGGAAAAGAGAGGCAGAGAAGAACGGTGGTTGAAGTTCTGAGAGAGCTAAACGCCGACGTTTTGGGCTTGCAAGACGTGAAGGCGGAGGAAGAGAACGGGATGAAGCCTTTGTCGGATTTGGCGAGTTCTCTGGGAATGAATTACGTCTTCGCCGAAAGCTGGGCTCCTCAATACGGCAACGCCGTTTTGTCCAAGTGGCCCATTAAACGCTGGAAGCTACAGAAAATCTTTGATCACAACGATTACAGGAATGTTCTGAAGGCCACTATCGATGTACCCCAAGAAGGTGAACTCCACTTTTACTGCACCCACCTTGATCATCTTGATGAGAATTGGAGAATGAAACAGATAAATGCAATAATTCAATCTAATGATGAGCCACACATTTTAGCTGGATGCCTTAATTCGCTCAATGAATCAGATTATTCCGAAGAAAGATGGACAGATATTGTAAAGTACTATGAAGAGATGGGAAAGCCAACACCGAAGGTTGAAGTGATGAAACATCTCAAGAGCAGACACTACACGGATGCTAAGGACTTTTCAGGGGAATGTGAGCCTGTTGTCATGATTGCCAAAGGACAAAGTGTCCAAGGGACATGTAAGTATGGAACTAGGGTTGATTACATATTATCTTCCTCAGATTCTCCATATAAATTCGTTACTGGATCCTACTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTAAAAGTAAATAGTAATCCTCAGGAAAATCTGACAAAGAAGCAGGGACAACCAAGACAGAAAGTTGCAAGAATAAAACCAAGTCCATCGAAATGTATATGGAAAACACACACTGGAGATATAGATTGA 1293 0.4664 MLKLLNNNLRRLSSHLRWSSRRRFKPKLRFTKPTLEPHTEPSPPPTKPIRIATFNAAFFSMAPVLPEADDKTTTSSDDNIGRAKSPYDRPRSILKQSQPPLLGKSKLRVSINLPDNEISLRQTSFSEHERSKLGSLSWSWSFAEGGKERQRRTVVEVLRELNADVLGLQDVKAEEENGMKPLSDLASSLGMNYVFAESWAPQYGNAVLSKWPIKRWKLQKIFDHNDYRNVLKATIDVPQEGELHFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGCLNSLNESDYSEERWTDIVKYYEEMGKPTPKVEVMKHLKSRHYTDAKDFSGECEPVVMIAKGQSVQGTCKYGTRVDYILSSSDSPYKFVTGSYLVLSSKGTSDHHIVKVDVVKVNSNPQENLTKKQGQPRQKVARIKPSPSKCIWKTHTGDID* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1267 430 MobiDBLite consensus disorder prediction 71 89 - -
Gso19g1267 430 MobiDBLite consensus disorder prediction 397 416 - -
Gso19g1267 430 MobiDBLite consensus disorder prediction 67 99 - -
Gso19g1267 430 Gene3D Endonuclease/exonuclease/phosphatase 137 390 IPR036691 -
Gso19g1267 430 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 144 424 - -
Gso19g1267 430 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 19 133 - -
Gso19g1267 430 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 19 133 - -
Gso19g1267 430 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 144 424 - -
Gso19g1267 430 SUPERFAMILY DNase I-like 47 388 IPR036691 -
Gso19g1267 430 Pfam Endonuclease/Exonuclease/phosphatase family 144 381 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1267 Gso-Chr19 41213334 41216964 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1267 - - gmx:100820515 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1267 19 41213334 41216964 Gso3g1266 3 38350476 38353925 GST
Gso19g1267 19 41213334 41216964 Gso2g1247 2 15509264 15513385 PCT
Gso19g1267 19 41213334 41216964 Gso10g0206 10 2130903 2135228 PCT
Gso2g1247 2 15509264 15513385 Gso19g1267 19 41213334 41216964 PCT
Gso10g0206 10 2130903 2135228 Gso19g1267 19 41213334 41216964 PCT