Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1264 ATGGCAATCAAAGAAGATGTGGAGGATCGCACACAGAAAGGAATCAGAGAGCCACTTGTTGTGGGGGAACAGAATCACCATGCAAACAAAGGGCATCCATGGATGGTTTACTTCAGTACATTTATTGCAGTGTGTGGCTCTTATGAATTTGGGGCCTGTGCTGGATATTCATCTCCCACCCAAGATGCTATCAGGAAGGATCTCAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGATCCATCTTGACTTTTGGTGCAATGGTTGGTGCAATAACAAGTGGACCTCTTGCTGATTTTATTGGACGTAAAGGGGCAATGAGAGTGTCAAGTGCTTTCTGTGTCGCAGGGTGGCTTGTTATTTATTTTTCTGAGGGTCCAGTGCCTTTGGACATTGGGAGGTTAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTGTAGCAGAAATTGCACCAAAAGAACTCCGAGGGGCACTGACTACCTTAAATCAGTTCATGATAGTTACTGCTGTGTCTGTGTCATTCATAATTGGAAATGTACTTTCATGGAGGGCTTTAGCTATAATTGGTCTCGTTCCCACTGCTGTGTTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCTAGATGGCTGGCAAAGAGAGGACATAAAAAAGATTTTGTGGCAGCACTGCAAATACTTCGTGGCAAAGATGCTGATATATCTGAGGAGGCAGAGGAAATTCAGGATTATATAACTAGTTTGGAGCAGCTCCCAAAATCCAGTCTGCTGGAATTATTTCATAGAAGATATTTGCGCTCAGTCACTATTGGAATAGGCCTTATGGTCTGCCAGCAGTTTGGGGGAATCAATGGAATTTGCTTTTATGCCAGCAGTATTTTTGAACAAGCAGGATTTTCTCCGACCATTGGGACTATAACATATGCTTGCCTTCAGATTGTGATCACAGGTCTTGGAGCAGCCTTCATAGATAAAGCTGGCAGGAAGCCCTTACTTCTGTTATCTGGATCTGGATTAGTCGCAGGATGTATATTTGCAGCAGTTGCATTCTATCTCAAGGTTCACGAGGTGGGTGTTGAGGCAGTCCCAGCGCTTGCCGTAACAGGCATACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCTGAGATATTTCCTGTCAATGTTAAAGGGCTAGCAGGAAGTGTGGCCACATTAACTAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCCTCATGAGCTGGAGCTCCTATGGTACCTTCATCCTTTATGCTGCAATTAATGCACTGGCTATATTATTTATAATTGTTGCGGTGCCAGAAACCAAGGGTAAAAGCTTGGAACAATTACAAGCAGACATTAACTCATAG 1416 0.4343 MAIKEDVEDRTQKGIREPLVVGEQNHHANKGHPWMVYFSTFIAVCGSYEFGACAGYSSPTQDAIRKDLSLSLAEYSLFGSILTFGAMVGAITSGPLADFIGRKGAMRVSSAFCVAGWLVIYFSEGPVPLDIGRLATGYGMGVFSYVVPVFVAEIAPKELRGALTTLNQFMIVTAVSVSFIIGNVLSWRALAIIGLVPTAVLLLGLFFIPESPRWLAKRGHKKDFVAALQILRGKDADISEEAEEIQDYITSLEQLPKSSLLELFHRRYLRSVTIGIGLMVCQQFGGINGICFYASSIFEQAGFSPTIGTITYACLQIVITGLGAAFIDKAGRKPLLLLSGSGLVAGCIFAAVAFYLKVHEVGVEAVPALAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNVKGLAGSVATLTNWFGAWLCSYTFNFLMSWSSYGTFILYAAINALAILFIIVAVPETKGKSLEQLQADINS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1264 471 Gene3D MFS general substrate transporter like domains 29 470 IPR036259 -
Gso3g1264 471 ProSiteProfiles Major facilitator superfamily (MFS) profile. 35 458 IPR020846 GO:0022857
Gso3g1264 471 TIGRFAM SP: MFS transporter, sugar porter (SP) family 34 464 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso3g1264 471 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 32 469 - -
Gso3g1264 471 PANTHER - 32 469 - -
Gso3g1264 471 PRINTS Sugar transporter signature 130 149 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso3g1264 471 PRINTS Sugar transporter signature 282 292 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso3g1264 471 PRINTS Sugar transporter signature 371 392 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso3g1264 471 PRINTS Sugar transporter signature 394 406 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso3g1264 471 SUPERFAMILY MFS general substrate transporter 31 466 IPR036259 -
Gso3g1264 471 ProSitePatterns Sugar transport proteins signature 1. 93 110 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso3g1264 471 Pfam Sugar (and other) transporter 47 467 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso3g1264 471 ProSitePatterns Sugar transport proteins signature 1. 323 340 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso3g1264 471 CDD MFS_GLUT6_8_Class3_like 37 464 IPR044775 GO:0008643|GO:0051119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1264 Gso-Chr3 38332007 38336506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1264 1 470 Organic Solute Cotransporters AT5G18840 58.455 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1264 K03444 - gmx:100785248 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1266 19 41203391 41208070 Gso3g1264 3 38332007 38336506 GST