Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1266 ATGGCGATCAAAGAAGATGTGGAGGAAGGCATGCAGAAAGGAGTCAGAGAGCCACTGGTGGTCCGTGCAAGCAAAGGGCATCCATGGATGGTTTACTTTACTACATTCGTTGCAGTGTGTGGTTCTTATGAATTTGGAGCTTGTGCGGGATATTCATCTCCCACTCAAGATGCTATCAGGAAGGATTTTAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGATCCATCTTGACTTTTGGTGCAATGGTTGGCGCAATAACAAGTGGGCCTATAGCCGATTTTATTGGACGGAAAGGGGCAATGAGAGTGTCAAGTGCTTTCTGTGTCGCAGGGTGGCTAGTTATTTACTTTGCTGAGGGCCCAGTGTATTTGGACATTGGGAGGCTATCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTGTAGCAGAAATTGCACCAAAAGAACTTCGAGGGACCCTGACTACCTTAAATCAGTTCATGATCACGGCTGCGGTGTCAGTGTCATTCACAATTGGAAACGTGTTTTCATGGAGGGTTTTAGCTATAATTGGCCTCATTCCCACTGCTGTATTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCTAGATGGCTGGCAAAGAGAGGACGTGAAAAAGATTTTGTGGCAGCACTGCAAATACTTCGTGGCAACGATGCTGATATATCTGAGGAGGCAGAGGAAATTCAGGATTATATAACTACTTTGGAGCGGCTCCCAAAATCCAGGCTGCTGGAATTGTTTCATAGAAGATATTTGCGCTCAGTCACTATTGGAATAGGCCTTATGGTCTGCCAGCAGTTTGGGGGAATCAATGGAATTTGCTTTTATACCAGCAGTATTTTTGAACTAGCAGGATTTTCTCCGACCATCGGGACTATTACATATGCCTGCCTTCAGATTGTGATCACAGGTCTTGGAGCAGCCTTAATAGATAAAGCTGGCAGGAAGCCCCTTCTTCTATTATCCGGATCGGGATTGGTCGCAGGATGCACATTTGTAGCAGTTGCATTCTATCTCAAGGTTCACGAGGTTGGTGTTGAGGCAGTCCCAGCACTTGCCGTAACTGGCATACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCTTGGGTTGTGATGTCTGAGATATTTCCTGTCAATATTAAAGGGCTGGCAGGAAGTGTGGCCACATTAGTGAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCTTCATGAGCTGGAGCTCCTATGGTACCTTCATCCTTTATGCAGCAATTAATGCACTGGCTATATTGTTTATAATTGTTGCGGTGCCAGAAACCAAGGGGAAAAGCTTGGAACAATTACAAGCAGACATTAACTCATAG 1401 0.4468 MAIKEDVEEGMQKGVREPLVVRASKGHPWMVYFTTFVAVCGSYEFGACAGYSSPTQDAIRKDFSLSLAEYSLFGSILTFGAMVGAITSGPIADFIGRKGAMRVSSAFCVAGWLVIYFAEGPVYLDIGRLSTGYGMGVFSYVVPVFVAEIAPKELRGTLTTLNQFMITAAVSVSFTIGNVFSWRVLAIIGLIPTAVLLLGLFFIPESPRWLAKRGREKDFVAALQILRGNDADISEEAEEIQDYITTLERLPKSRLLELFHRRYLRSVTIGIGLMVCQQFGGINGICFYTSSIFELAGFSPTIGTITYACLQIVITGLGAALIDKAGRKPLLLLSGSGLVAGCTFVAVAFYLKVHEVGVEAVPALAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGLAGSVATLVNWFGAWLCSYTFNFFMSWSSYGTFILYAAINALAILFIIVAVPETKGKSLEQLQADINS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1266 466 Gene3D MFS general substrate transporter like domains 24 465 IPR036259 -
Gso19g1266 466 Pfam Sugar (and other) transporter 41 462 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso19g1266 466 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 453 IPR020846 GO:0022857
Gso19g1266 466 PRINTS Sugar transporter signature 125 144 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso19g1266 466 PRINTS Sugar transporter signature 277 287 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso19g1266 466 PRINTS Sugar transporter signature 366 387 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso19g1266 466 PRINTS Sugar transporter signature 389 401 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso19g1266 466 CDD MFS_GLUT6_8_Class3_like 32 459 IPR044775 GO:0008643|GO:0051119
Gso19g1266 466 ProSitePatterns Sugar transport proteins signature 1. 318 335 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso19g1266 466 SUPERFAMILY MFS general substrate transporter 28 461 IPR036259 -
Gso19g1266 466 ProSitePatterns Sugar transport proteins signature 1. 88 105 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso19g1266 466 PANTHER - 27 464 - -
Gso19g1266 466 TIGRFAM SP: MFS transporter, sugar porter (SP) family 28 459 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso19g1266 466 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 27 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1266 Gso-Chr19 41203391 41208070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1266 1 465 Organic Solute Cotransporters AT5G18840 57.829 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1266 K03444 - gmx:100819822 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1266 19 41203391 41208070 Gso3g1264 3 38332007 38336506 GST