Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1247 ATGACTGGAAAAGCATCAGCTTCAAAACCTAATATAGGTCTGAGTGGATCTGATGGTCTTTCACATGCTTACATTCAGTATCCGCCACTTCGGTTCAATGTTCCTGGATCAAGTGGATTATTTTATGATGATGGAAATAAGTTTCTACTCTCTCCAACAGCTGACCAGGTTTTTTCTTGGAAAGTTGGTCCCTTTGATCCTCTCAGTGATCCAAACACTGATTCAATAAGTGAAGGCCCCATTATAGCTATTCGGTATTCTTTAGACACAAAGGTAATAGCAATCCAACGATCAAACCATGAGATACAGTTTTGGGATAGAGAGACTGGGGGGACTTTTAGCCATAAATGCAAGCCAGAATCAGAAAGTATACTTGGATTCTTTTGGACAGATAGTCAACAGTGTGATATTGTTCTTGTTAAGACCAGTGGTCTAGACTTGTACACATATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGCCTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCCATGGATTTCAGATTTCAGCTGCTGATATTGTTCGCTTGCCTAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCATCTGAAGATGTCTTTATTGTAACTGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCTATGCTGCTCCATTCTTATAGGCTATATCGTGATGCAGTGATACAGCAGGGCTCTTTACCAATTTATTCCAGTAGGATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTGTTTGCAGATTCCCGAGCACCGATATCTGCACCACTTCCTTTATTATTAAGGGGTTTCCCCAGATCCAGCACTTTATCTCAATCTAGTGGCAGAGAAAGTGAGAGTTCAGACGGTAATGTTTTGAGTAATCATGAAGCAGTTACATATGCCAATACATGGACTTTCCTAGTGCCTGACCTCGTATGCGACGTGGCCAATAAATTATTGTGGAAGTTCAATTTAGACTTAGAGGCAATTTCTGCTAGTAGCTCTGAGGTCCCATCAATATTAGAGTTCCTGCAGCGGCGGAAGTTGGAAGCTAACAAGGCTAAACAATTGTGCTTGGGTATAACACGTACACTTATTCTAGAGCATAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCACCTCATACTCCCATTCAATTAAAACCGGTAGCTATCTTAAGGGACTGAAACCAGAGAACACATCAACTTCTGTTGTACAAAATACTGGTGCTGAGGTATCTGCTACCGAAACAAATGTAATTGGAAAATCAATCGTCCATGAATCTACAAGAAGAGTAGACAGTGGATCTCTTAATAAAGCTTCAACTGTTTCAAGTTTGGATTCTGAGGATGAGTCCCAGTCTGCAAATCTGAAACATAGTTCAAAGGAAGTCCAAGTGGAGGATGAAGTGAATAATGAGATATCTTTGAGCAAAGGAGCTCACAGTGCTTATGTTATGCAATCATCTCTTCAGTCTGGGCAAGAGGAATCCCAACTTACTTCCGCAGCAATTTCGCCAGACGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTTGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTTCTTCACAGTGCAAATTCAGAGAAGATTCGCATACTCCCAAATGTTTATGTATTAATAATTCAACTTCTGGCCCGCAATGAACATTATGCAGAGCTCGGGTTATTTGTCTTAAACAAGATTCTGGAGCCCTCTAAAGAAGTTGCACTACAACTCCTAGAGTCTGGTCGTCAGAATGCCCAAACTAGGAAGCTTGGTCTGGATATGCTGAGACAACTGGGTTTACATCATGATTATGTTTTACTGCTCGTGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACGGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATGACTCCCAACATCTTGCTGCGGTTCTTAGATTCTTTACAGATTTCCTTCCTAGCTTCAAAAACACCTTTGACCATAATAGATACTGCCGCATACTGAATGAAATGAACTCATCCACGAATGTTTGA 2220 0.4099 MTGKASASKPNIGLSGSDGLSHAYIQYPPLRFNVPGSSGLFYDDGNKFLLSPTADQVFSWKVGPFDPLSDPNTDSISEGPIIAIRYSLDTKVIAIQRSNHEIQFWDRETGGTFSHKCKPESESILGFFWTDSQQCDIVLVKTSGLDLYTYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISAADIVRLPRFEMVMAKSEANSKPVLASEDVFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTLSQSSGRESESSDGNVLSNHEAVTYANTWTFLVPDLVCDVANKLLWKFNLDLEAISASSSEVPSILEFLQRRKLEANKAKQLCLGITRTLILEHRPVPVVAKAVNVLVTSYSHSIKTGSYLKGLKPENTSTSVVQNTGAEVSATETNVIGKSIVHESTRRVDSGSLNKASTVSSLDSEDESQSANLKHSSKEVQVEDEVNNEISLSKGAHSAYVMQSSLQSGQEESQLTSAAISPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRILPNVYVLIIQLLARNEHYAELGLFVLNKILEPSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYTVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPSFKNTFDHNRYCRILNEMNSSTNV* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1247 739 MobiDBLite consensus disorder prediction 478 511 - -
Gso3g1247 739 SUPERFAMILY WD40 repeat-like 39 159 IPR036322 GO:0005515
Gso3g1247 739 MobiDBLite consensus disorder prediction 481 498 - -
Gso3g1247 739 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 15 736 IPR040371 GO:0010506|GO:0035658
Gso3g1247 739 Pfam Colon cancer-associated protein Mic1-like 572 712 IPR009755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1247 Gso-Chr3 38133500 38145283 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1247 K24763 - gmx:100788425 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1247 3 38133500 38145283 Gso3g1247 3 38133500 38145283 ECH
Gso19g1249 19 41005044 41014367 Gso3g1247 3 38133500 38145283 GST