Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1249 ATGTCTGGAAAAGCATCAACTTCAAAGCCTAATATAGGTCTGAGTGGATCTGATGGTCTTTCACATGCTTACATTCAGTATCCGCCACTTCGGTGCAATGTTCCTGGATCAAGTGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCTCCAACAGCTGACCAGGTTTTTTCATGGAAAGTTGGTCCCTTTGATACTCTCATTGATCCAACCACTGATTCAATAAGTGAAGGCCCTATCATAGCTATTCGGTATTCTTTAGACACAAAGGTAATAGCAATCCAACGTTCAAACCATGAGATACAGTTTTGGGATAGAGAGACTGGGGGGACTTTTAGCCATAAGTGCAGGCCAGAATCAGAAAGTATACTTGGATTCTTTTGGACAGATAGTCAACAGTGTGATATTGTTCTTGTTAAGACCAGTGGTCTAGACTTGTACGCATATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGCCTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCAATGGATTTCAGATTTCATCTGCAGATATTGTTCGCTTGCCAAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCAGCTGAAGATGCCTTCATTGTCACCGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCTATGCTGCTTCATTCTTATAGGCTATATCGTGATGCAGTGATTCAGCAGGGCTCTTTACCAATTTATTCCAACAGTATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTGTTTGCAGATTCTCGAGCACCAATATCTGCACCGCTTCCTTTGCTATTAAGGGGTTTCCCCAGATCCAGCACTTTATCTCAATCTAGTGGTAGAGAAAGTGAGAGCACAGACGGTAATGTTTTGAGCAATCATGAAGCAGTTACATATGCCAATACATGGACTTTTCTAGTGCCTGACCTCGCAATTTCTGCTAGTAGCTCAGAGGTCCCATCAGTATTAGAGTTCCTGCAGCGGCGGAAGTTGGAAGCTAACAAGGCTAAACAATTGTGCTTGGGTATAGCACGTGCACTTATTCTAGAGCATAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCACCTCATACTCCCATTCAATTAAAACTGGTAGCTATTTTAAGGGACTGAAACCAGAGAAGTCATCAACTTCTGTTGTACAAAATACTGGTGCTGAGGTATCTGCTATCGAAACAGATGTAATTGGAAAATCAATCATCCATGAATCTACGAGAAGAGTAGACAGTGGATCTCTTAATAAAGCGTCAACTGTTTCAAGTTTGGATTCTGAGGATGAGTCCCAGTCTGCAAATCCAAAACACAGTTCAAAGGAAGCCCAAGTGGAGGGTGAAGTGAATAATGAGATATCTCTGAGCACTGGAGCTCACAGTTCTTATGTTATGCAATCATCTCTTCAGTCTGGGCAAGAGGAATCCCAACTTACTTCTGCAGCAGTTTCGCCAGACGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTTGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTCAGAGAAGATTCGTATACTCCCAAATGTTTATGTATTAATAATTCAACTAATGGCCCGCAATGAACATTATGCAGAGCTCGGGTTGTTTGTCTTAAACAAGATTCTGGAGTCCTCTAAAGAAGTTGCACTACAACTACTAGAGTCTGGCCGCCAGAATGCCCAAACTAGGAAGCTTGGTCTGGATATGCTAAGACAACTTGGTTTACATCATGATTATGTTTTACTGCTTGTGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAGTACAGGAATTACTTTCAGGTGGATACGATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATGACTCCCAACATCTTGCTGCGGTTCTAAGATTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCAGACCATAATAGATACTGCTGCATACTGAATGAAATGAACTCATCCACGACTGTTTGA 2181 0.4154 MSGKASTSKPNIGLSGSDGLSHAYIQYPPLRCNVPGSSGLFYDDGNKLLLSPTADQVFSWKVGPFDTLIDPTTDSISEGPIIAIRYSLDTKVIAIQRSNHEIQFWDRETGGTFSHKCRPESESILGFFWTDSQQCDIVLVKTSGLDLYAYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFNGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDAFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSNSIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTLSQSSGRESESTDGNVLSNHEAVTYANTWTFLVPDLAISASSSEVPSVLEFLQRRKLEANKAKQLCLGIARALILEHRPVPVVAKAVNVLVTSYSHSIKTGSYFKGLKPEKSSTSVVQNTGAEVSAIETDVIGKSIIHESTRRVDSGSLNKASTVSSLDSEDESQSANPKHSSKEAQVEGEVNNEISLSTGAHSSYVMQSSLQSGQEESQLTSAAVSPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRILPNVYVLIIQLMARNEHYAELGLFVLNKILESSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYRNYFQVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSDHNRYCCILNEMNSSTTV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1249 726 MobiDBLite consensus disorder prediction 482 496 - -
Gso19g1249 726 MobiDBLite consensus disorder prediction 465 498 - -
Gso19g1249 726 Pfam Colon cancer-associated protein Mic1-like 555 699 IPR009755 -
Gso19g1249 726 MobiDBLite consensus disorder prediction 465 481 - -
Gso19g1249 726 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 15 722 IPR040371 GO:0010506|GO:0035658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1249 Gso-Chr19 41005044 41014367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1249 K24763 - gmx:100500389 1377.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1249 19 41005044 41014367 Gso3g1247 3 38133500 38145283 GST