Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1246 ATGGCATCGAAGCACGGTGTGAAATCGAGAAGGTTCGGATTGAGTGGCTCAAAAGCTGCGAATTCGCCTTCATCTTCCACCGCGTCGTCTTCTAAGCAGTTTCAGGAGTCATCGGCTGATGGTCTGAGCTCGTCGGCGAGGAGTAAGCCGCAGCATTTTGCTCCAGAAACTGTTGCGGCTGCGCCACCTTTGGATGGACAGAGAGTGAAGGAAAATGTCACGGTGACGGTCCGATTTCGGCCTCTGAATCCAAGGGAAATTCGACAAGGAGAGGAGATTGCTTGGTATGCAGATGGAGAAACTATAGTGCGAAATGAGTATAATCCGTCCATAGCATATGCATACGATCGTGTCTTTGGTCCCACAACCACAACTCGTCAGGTCTATGATGTTGCTGCTCAGCATGTTGTTAGTGGTGCTATGGAGGGCATCAATGGTACAGTATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCCCTTTCCGTGAAGGATGTTTTTAGCATTATCCAAGAGACTCCAAACCGAGAGTTTCTCCTTCGAGTTTCATACTTGGAGATCTACAATGAGGTGGTTAATGACTTATTAAATCCAGCAGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGCACCTATGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTGTCCCTTATTGCAGCTGGAGAAGAGCACAGACATGTTGGGTCTACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACGCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTAACACTGTCACAACTGAATCTCATCGATCTAGCAGGTTCTGAGAGCTCAAAAGCTGAAACAACTGGTATGAGAAGGAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACTCTTGGAACTGTTATTTCAAAATTGACTGAAGATAAAGCTAGTCACATACCTTACAGGGATTCCAAATTGACTAGAGTTCTTCAGTCTTCGCTCAGTGGTCATGGACGTGTTTCTCTTATTTGCACAGTAACCCCTTCATCTAGTAGTACTGAAGAGACACATAATACATTGAAGTTTGCTCACCGGGCAAAGTACATTGAAATACGAGCAGCACAAAACAAGATAATTGATGAGAAATCACTTATCAAGAAATACCAACAAGAGATTCAATGCTTAAAGGAAGAACTGGAAAAATTAAAGAGGGGTATTGTCACAGTTCAACCAAAAGATACCGAGGATGATGACATTGAGCTCCTAAAACAGAAGTTAGAAGATGGTCAAGTTAAGTTGCAATCCCGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTATTAGGCAGAATTCAACGGTTGACTAAGTTGATTTTGGTCTCCACAACAGCATCATCGTCCACAAGATTTCCTAACAGACCTGGTCCTCGTAGAAGACATTCCTTCGGGGAAGAGGAGCTGGCATACCTTCCATACAAAAGGCGGGATTTAATCTTAGACGAGGAAAATATTGATTTGTATGTTAATCTGGAGGGAAATGCTGCAACAGCTGATGATTCTTTTAAGGGCGAGAAAAAGATGAAGAAACATGGATTACTAAATTGGTTGAAGTTACGTAAACGAGACAGTGCCTTGACTGGCACTAGTGATAAATCCAGTGGAGCAAAATCTACTAGCACACCTTCCACACCTCAAGCAGAAAGTGGTAATCATGTGGAGTCCAGACTTTCTCATTCTCAACCTGCAGAAAGCTCTCCCTCTGCTGATCTTGCATCAGAGGCAAGAGAGGATAAATATATTCATGAGGACAGTTTATTGGGACAGGAGACTCCTTTGACAAGCATCAAATCGGTTGATCAGATTGATCTTCTGAGGGAGCAGCACAAGATTTTATCTGGAGAAGTGGCACTTCATTCAAGTGCTTTGAAGAGGCTATCTGACGAAGCAACAAGAAATCCTCAGAATGGTCATATTGATGTGGAGATGAAAAAGTTGAAGGATGAAATTACAGCAAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATTTCTAATTCTTTCATTGCTTCAGATAAGACAGAACACTCAGGAGCATTGCAGACTGTTGCTGAGCTGATGGCACAATTAAACGAGAAATCCTTTGAACTTGAGGTCAAAGCAGCAGATAACCGTGTAATTCAAGAACAGCTTAATCAGAAGATTTGTGAATGTGAAAGCCAGCAAGAAACGATTGCCTCTCTTAAACAGCAACTTGCTGATGCATTGGACTTGAGAAATTTCAGCCATGTAGTCAATCATTCACAAAATTTCTCTGGAACCAAAGATTATTGTGGTGAACTTCATCTTGACAAGGGGAATGTGACAATAAACAATTCAAATGAAGGGATTCAATTGCAAGCACAGATAAGTGAGATAGAAGATCTGAAGCAGAGAGTGGCAGAACTAACAGAATCAAAGGAGCAGTTAGAATTTAGAAATCAGAAATTGGCAGAAGAGAGTTCCTATGCTAAAGGGCTTGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTTGCCAAATTCATGAACCAGAACGAGAGACTAGCTGCTGAGCTAGCTGCATCCAAGAATTCACCCGCTGAACGTAGAACTAGTGGCACAGTCCAAAATGGACGAAGGGAAAGTCATGCTAGAGTTAGACGAAATGATCAGGGTGCATCAAACGCCAATATCAAGAGAGAATTAGCCTTGAGCAAAGAAAGGGAACTTTCATATGAAGCTTCCCTTTTAGAGAAAGATGAGAAAGAGGCCGAACTTCAAAGAAAGATTGAGGAGTCAAAGAAAAGAGAAGCATACCTGGAAAATGAACTTGCCAACATGTGGGTCCTTGTGGCAAAGCTAAAAAAGTCACAAGGAGCTGAAACTGATGTTTCGGTGTCAACCATAGAGAATTTGCAGTTGGATGGTTGA 3024 0.4233 MASKHGVKSRRFGLSGSKAANSPSSSTASSSKQFQESSADGLSSSARSKPQHFAPETVAAAPPLDGQRVKENVTVTVRFRPLNPREIRQGEEIAWYADGETIVRNEYNPSIAYAYDRVFGPTTTTRQVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLSVKDVFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSTEETHNTLKFAHRAKYIEIRAAQNKIIDEKSLIKKYQQEIQCLKEELEKLKRGIVTVQPKDTEDDDIELLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTTASSSTRFPNRPGPRRRHSFGEEELAYLPYKRRDLILDEENIDLYVNLEGNAATADDSFKGEKKMKKHGLLNWLKLRKRDSALTGTSDKSSGAKSTSTPSTPQAESGNHVESRLSHSQPAESSPSADLASEAREDKYIHEDSLLGQETPLTSIKSVDQIDLLREQHKILSGEVALHSSALKRLSDEATRNPQNGHIDVEMKKLKDEITAKSEQIDLLEKQISNSFIASDKTEHSGALQTVAELMAQLNEKSFELEVKAADNRVIQEQLNQKICECESQQETIASLKQQLADALDLRNFSHVVNHSQNFSGTKDYCGELHLDKGNVTINNSNEGIQLQAQISEIEDLKQRVAELTESKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKFMNQNERLAAELAASKNSPAERRTSGTVQNGRRESHARVRRNDQGASNANIKRELALSKERELSYEASLLEKDEKEAELQRKIEESKKREAYLENELANMWVLVAKLKKSQGAETDVSVSTIENLQLDG* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1246 1007 MobiDBLite consensus disorder prediction 905 919 - -
Gso3g1246 1007 Coils Coil 393 427 - -
Gso3g1246 1007 SMART kinesin_4 70 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1246 1007 Coils Coil 752 779 - -
Gso3g1246 1007 Coils Coil 445 479 - -
Gso3g1246 1007 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1246 1007 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1246 1007 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1246 1007 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1246 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 426 IPR027417 -
Gso3g1246 1007 MobiDBLite consensus disorder prediction 1 65 - -
Gso3g1246 1007 MobiDBLite consensus disorder prediction 566 615 - -
Gso3g1246 1007 PANTHER CENTROMERE PROTEIN E 48 1001 - -
Gso3g1246 1007 Coils Coil 684 704 - -
Gso3g1246 1007 Gene3D Kinesin motor domain 64 422 IPR036961 -
Gso3g1246 1007 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 48 1001 - -
Gso3g1246 1007 Coils Coil 862 896 - -
Gso3g1246 1007 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso3g1246 1007 MobiDBLite consensus disorder prediction 890 928 - -
Gso3g1246 1007 Pfam Kinesin motor domain 78 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1246 1007 MobiDBLite consensus disorder prediction 15 51 - -
Gso3g1246 1007 ProSiteProfiles Kinesin motor domain profile. 72 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1246 1007 CDD KISc_CENP_E 72 391 - -
Gso3g1246 1007 Coils Coil 943 974 - -
Gso3g1246 1007 MobiDBLite consensus disorder prediction 569 609 - -
Gso3g1246 1007 Coils Coil 820 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1246 Gso-Chr3 38114350 38130577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1246 1 723 Miscellaneous Gene Families AT5G06670 68.033 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1246 K11498 - gmx:100787892 1894.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1246 3 38114350 38130577 Gso3g1246 3 38114350 38130577 ECH
Gso19g1248 19 40981679 40998019 Gso3g1246 3 38114350 38130577 GST
Gso3g1246 3 38114350 38130577 Gso2g1451 2 28178639 28196009 PCT
Gso2g1451 2 28178639 28196009 Gso3g1246 3 38114350 38130577 PCT