Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1248 ATGGCATCGAAGCAAGGTGTGATGAAATCGAGGAGGTTCGGATTGAGTGGCTCTAAAGGTGCGAATTCGCCTTCGTCTTCCACCACGTCGTCTTCTAAGCAGTTTCAGGAGACATCGGCCGATGGCCTGAGCTCGCCGGCGTCTTCGTCGGCTCGGAGTAAGCCGCAGCATTTTACTCCAGAAACTGCGGTTGCGCTACCTTTGGATGGAAAGAGAGTGAAGGAAAATGTCACAGTGACGGTCCGATTCCGGCCTCTGAATCCAAGGGAAATTCGTCAAGGAGAGGAGATTGCTTGGTATGCAGATGGAGAAACTATATTGCGAAATGAGTATAATCCATCCATAGCATATGCATACGATCGTGTCTTTGGTCCCACAACCACAACTCGTCAGGTCTATGATGTTGCTGCTCAGCATGTTGTTAGTGGTTCTATGGAGGGCATCAATGGTACGGTATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCCCTTGCCGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAACCGAGAGTTTCTCCTTCGAGTTTCATACTTGGAGATCTACAATGAGGTGGTTAATGACTTATTAAATCCAGCAGGACAGAACCTAAGAATCAGAGAGGATGCTCAGGGCACCTATGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTATCCCTTATTGCAGCTGGAGAAGAGCACAGGCATGTTGGGTCCACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACCCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTAACACTGTCACAACTGAATCTCATCGATCTAGCTGGTTCTGAGAGCTCAAAAGCTGAAACAACTGGTATGAGAAGGAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACTCTTGGAACTGTTATTTCAAAATTGACTGAAGATAAAGCTAGTCACATACCTTACAGGGATTCCAAATTGACTAGAGTACTTCAGTCTTCGCTAAGTGGTCATGGACGTGTTTCTCTTATTTGCACAGTAACCCCTTCATCTAGTAGTACTGAAGAGACGCATAATACATTGAAGTTTGCTCACCGGGCAAAGTACATTGAAATACGAGCAGCACAAAACAAGATAATTGATGAGAAGTCACTTATCAAGAAATACCAGCAAGAGATTCAATGCTTAAAGGAAGAATTGGAACAATTAAAGAGGGGCATTGTCACAGTTCAACCAAAAGATACTGGGGATGCTGACATTGAGCTCCTAAAACAGAAGTTAGAAGATGGTCAAGTTAGGTTGCAATCCAGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTGTTAGGCAGAATTCAACGGTTGACTAAGTTGATTTTGGTCTCCACAAAAGCATCACCGTCCACAAGATTTCCTAACAGACCTGGTCCTCGTAGAAGACATTCCTTTGGGGAAGAGGAGCTGGCTTACCTTCCATACAAAAGGCGGGATTTAATCTTAGACGAGGAAAACATTGATTTGTATGTTAATCTGGAGGAAAATGCTGCAACAGTTGATGATTCTTTTAAGGGCGAGAAAAAGACGAAGAAACATGGACTACTAAATTGGTTGAAGTTACGTAAACGAGACAGTGCCTTGACAGGCACAAGTGATAAATCCAGTGGAGCAAAATCTACTAGCACACCTTCTACACCTCAAGCAGAAAGTGGTAATCATGTGGAGTCCAGACTTTCTCATTCTCAACCTGCAGAAAGCTCTCCCTCTGCTGATCTTGCATCAGAGGCAAGAGAGGATAAATATATTCATGTGGATAGTTTATTGGGACAGGAGACTCCTTTGACAAGCATCAAATCGGTTGATCAGATTGATCTTCTGAGGGAGCAGCACAAGATTTTATCTGGAGAGGTGGCACTTCATTCAAGTGCTTTGAAGAGGTTGTCAGACGAAGCAACAAGAAATCCCCAGAATGGTCAGGTTCATGTGGAGATGAAAATGTTGAAGGATGAAATTACAGCAAAGAGTGAACAAATAGATTTGCTGGAAAAGCATATTTCTAATTCTTTCATTGCTTCAGATAAGACAGAAGAGTCAGGAGCATTGCAGACTGTTGCTGAGCTGATGGAACAATTAAACGAGAAATCCTTTCAACTTGAGGTCAAAGCAGCAGATAATCGTGTAATTCAAGAACAGCTTAATCAGAAGATTTGTGAATGTGAAAGCCAGCAAGAAACAATTGCCTCTCTTAAACAGCAACTTGCGGATGCATTGGAGTTGAGAAATTTCAGCCCTGTAGTCAATCATTCACAAAACTTCTCTGGAACCAAAGACTATTGTGGTGAACTTCACCTTGACAGGGGGAATGTGACGGTAAACAATTCCAATGAAGGGATTCATTTGCAAGCACAGATAAGTGAGATAGAAGATCTGAAGCAGAGAGTGGCAGAACTAACAGAATCAAAGGAGCAGTTAGAATTTAGAAATCAGAAATTGGCAGAAGAGAGTTCCTATGCTAAAGGGCTTGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAGGTTGCCAAACTCATGAACCAGAACGAGAGACTAGCTGCTGAGCTAGCTGCATCCAAGAATTCACCCGCTGAACGTAGAACTAGTGGCACAGTCCAAAATGGACGAAGGGAAAGTCATGTTAGAGTTAGACGAAATGATCAGGGTGCATCAAACGCCAATATCAAGAGAGAATTAGCCTTGAGCAAAGAAAGGGAACTTTCATATGAAGCTGCTCTTTTAGAGAAAGATCAGAAAGAGGCCGAACTTCAAAGAAAGATTGAGGAGTCAAAGCAAAGAGAAGCATACCTGGAAAATGAACTTGCCAACATGTGGGTCCTTGTGGCAAAGCTAAAAAAGTCACAAGGAGCTGAAACTGATGTTTCAGTGTCAACTAAAGAGAGTTTGCAGTTGGATGGTTTTGACGTTTGA 3045 0.4289 MASKQGVMKSRRFGLSGSKGANSPSSSTTSSSKQFQETSADGLSSPASSSARSKPQHFTPETAVALPLDGKRVKENVTVTVRFRPLNPREIRQGEEIAWYADGETILRNEYNPSIAYAYDRVFGPTTTTRQVYDVAAQHVVSGSMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSTEETHNTLKFAHRAKYIEIRAAQNKIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDTGDADIELLKQKLEDGQVRLQSRLEQEEEAKAALLGRIQRLTKLILVSTKASPSTRFPNRPGPRRRHSFGEEELAYLPYKRRDLILDEENIDLYVNLEENAATVDDSFKGEKKTKKHGLLNWLKLRKRDSALTGTSDKSSGAKSTSTPSTPQAESGNHVESRLSHSQPAESSPSADLASEAREDKYIHVDSLLGQETPLTSIKSVDQIDLLREQHKILSGEVALHSSALKRLSDEATRNPQNGQVHVEMKMLKDEITAKSEQIDLLEKHISNSFIASDKTEESGALQTVAELMEQLNEKSFQLEVKAADNRVIQEQLNQKICECESQQETIASLKQQLADALELRNFSPVVNHSQNFSGTKDYCGELHLDRGNVTVNNSNEGIHLQAQISEIEDLKQRVAELTESKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLAAELAASKNSPAERRTSGTVQNGRRESHVRVRRNDQGASNANIKRELALSKERELSYEAALLEKDQKEAELQRKIEESKQREAYLENELANMWVLVAKLKKSQGAETDVSVSTKESLQLDGFDV* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1248 1014 MobiDBLite consensus disorder prediction 993 1014 - -
Gso19g1248 1014 PANTHER CENTROMERE PROTEIN E 52 1006 - -
Gso19g1248 1014 MobiDBLite consensus disorder prediction 909 923 - -
Gso19g1248 1014 Coils Coil 397 431 - -
Gso19g1248 1014 ProSitePatterns Kinesin motor domain signature. 295 306 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso19g1248 1014 Coils Coil 756 783 - -
Gso19g1248 1014 Coils Coil 449 483 - -
Gso19g1248 1014 Gene3D Kinesin motor domain 68 426 IPR036961 -
Gso19g1248 1014 PRINTS Kinesin heavy chain signature 147 168 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1248 1014 PRINTS Kinesin heavy chain signature 261 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1248 1014 PRINTS Kinesin heavy chain signature 296 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1248 1014 PRINTS Kinesin heavy chain signature 345 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1248 1014 MobiDBLite consensus disorder prediction 16 57 - -
Gso19g1248 1014 Coils Coil 688 708 - -
Gso19g1248 1014 Coils Coil 866 900 - -
Gso19g1248 1014 MobiDBLite consensus disorder prediction 894 927 - -
Gso19g1248 1014 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 52 1006 - -
Gso19g1248 1014 SMART kinesin_4 74 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1248 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 430 IPR027417 -
Gso19g1248 1014 ProSiteProfiles Kinesin motor domain profile. 76 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1248 1014 Coils Coil 947 978 - -
Gso19g1248 1014 MobiDBLite consensus disorder prediction 573 613 - -
Gso19g1248 1014 CDD KISc_CENP_E 76 395 - -
Gso19g1248 1014 Pfam Kinesin motor domain 82 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1248 1014 MobiDBLite consensus disorder prediction 570 618 - -
Gso19g1248 1014 MobiDBLite consensus disorder prediction 1 66 - -
Gso19g1248 1014 Coils Coil 824 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1248 Gso-Chr19 40981679 40998019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1248 1 727 Miscellaneous Gene Families AT5G06670 69.074 0.0 923
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1248 K11498 - gmx:100815027 1910.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1248 19 40981679 40998019 Gso3g1246 3 38114350 38130577 GST
Gso19g1248 19 40981679 40998019 Gso2g1451 2 28178639 28196009 PCT
Gso2g1451 2 28178639 28196009 Gso19g1248 19 40981679 40998019 PCT