Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1238 ATGGCTCGTTACGGTGAGGGCGACAAGCGGTGGATCGTGGAGGACCGCCCCGACGGCACCAATGTCCACAACTGGCATTGGTCCGAGACCAACTGCCTCGACTGGTCCAAGACCTTCTTCACCAGCCTCCTCACTAACCTCCCTATCCTCGACGGCGAGGGTAACCTCTTCCTCAAAACGACGTCGCTTCGCTCCCTCGACGGCGAGGCCTACATCAATGTCCGAAAGGGGAAGATCATCCCCGGCTACGAGATCAGCCTCACTCTCAATTGGCAGGGAGAGGCCAAAGACACCCTGGGAACCTCTCTTCTCAAGGTCGACGGCACCGTCGAGATCCCCTACATCTCCGACGAGAACGCCGACGAGGATCCCGAGGTTAGGGTTACTGTCGACGACGAGGGACCGGTTGGAAAGAGGATTAAGGATGCCATGGTTTCCAAGGGGAAGCCCTTGATCTTGGAGAAGGTTAGGGTTTGGGTGCAGAGCATGGCCAAAGGAGGTCCTGTTAAGGACGAATTGGAACCCAAGAAGGTTGCGCCGTCGTCGTTGTCGCCGTCTCCGGCGGCGACAACGACAACGACGACTCCGACGACGACGAAAACAACGGCTGCTGCGCCGAAGAAGGAGGAGAAGAAGGAGAAGGTGAAGAAGGGAAGGAAGAGTATTAGCATGACGGAGAGGTTTAATTGCAGAGCTAAAGATTTGTTTGAGATTTTGATGGATGAGAATAGGTGGAAGGGTTTTACACAGAGCAATGCGAGGATTAGTAAGGAGGTTGGGGGTGAATTTAGCATTTTCGATGGGTCGGTTACTGGAACTAATTTAGAGTTGCAGGAGGGTAAGTTGATTGTTCAGAGATGGAGGTTTGGAAGCTGGAATGATGGAGTTCAATCCACAGTGAGGCTTGAGTTTGAGGAGCCTGAATCGGGTGTTACGGTTGTTAAGCTGACACATACTGATGTGCCTGAAGAGGATAGGTATGGGAATGCTACTGTGGTGGAGAACACGGAAAGGGGGTGGCGGGATCTTATTTTCCAGAGGATACGTGCTGTTTTTGGTTTTGGAATTTGA 1071 0.5275 MARYGEGDKRWIVEDRPDGTNVHNWHWSETNCLDWSKTFFTSLLTNLPILDGEGNLFLKTTSLRSLDGEAYINVRKGKIIPGYEISLTLNWQGEAKDTLGTSLLKVDGTVEIPYISDENADEDPEVRVTVDDEGPVGKRIKDAMVSKGKPLILEKVRVWVQSMAKGGPVKDELEPKKVAPSSLSPSPAATTTTTTPTTTKTTAAAPKKEEKKEKVKKGRKSISMTERFNCRAKDLFEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEGKLIVQRWRFGSWNDGVQSTVRLEFEEPESGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1238 356 MobiDBLite consensus disorder prediction 169 220 - -
Gso3g1238 356 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Gso3g1238 356 SUPERFAMILY Bet v1-like 221 355 - -
Gso3g1238 356 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 356 IPR039981 GO:0001671|GO:0051879
Gso3g1238 356 CDD SRPBCC_Aha1 221 354 - -
Gso3g1238 356 Pfam Activator of Hsp90 ATPase homolog 1-like protein 232 352 IPR013538 -
Gso3g1238 356 Gene3D - 18 174 IPR036338 -
Gso3g1238 356 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Gso3g1238 356 Coils Coil 356 356 - -
Gso3g1238 356 Gene3D - 219 355 IPR023393 -
Gso3g1238 356 MobiDBLite consensus disorder prediction 204 220 - -
Gso3g1238 356 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Gso3g1238 356 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 356 - -
Gso3g1238 356 MobiDBLite consensus disorder prediction 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1238 Gso-Chr3 38024539 38026214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1238 - - gmx:100784184 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1238 3 38024539 38026214 Gso3g1238 3 38024539 38026214 ECH
Gso19g1241 19 40892515 40894014 Gso3g1238 3 38024539 38026214 GST
Gso3g1238 3 38024539 38026214 Gso2g1455 2 28402181 28405085 PCT
Gso2g1455 2 28402181 28405085 Gso3g1238 3 38024539 38026214 PCT