Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1241 ATGGCTCGTTACGGCGAGGGCGACAAGCGGTGGATCGTGGAGGACCGCCCCGACGGCACCAACGTCCACAACTGGCACTGGTCCGAGACCAACTGCCTCGACTGGTCCAAAACCTTCTTCAGCAACCTCCTCTCCAACCTCCCTATCCTCCACGGCGAGGCTAACCTCTTCCTCAAAACGACGTCGCTCCGCTCCCTCGACGGCGAGGCCTACGTCAACGTCCGCAAGGGGAAAATCATCCCCGGCTACGAGATCAGCCTCACACTCAATTGGCAGGGCGAAGCCAAAGATTCCCAGGGAACCTCGCTTCTTAAAGTCGACGGCACCGTCGAGATTCCCTACATCTCCGACGAGAACGCCGACGAAGATCCCGAGGTTAGGGTTACCGTTAACGATGAGGGACCGGTTGGGATGAGGATTAAGGACGCCATGCTTTCCAAGGGGAAGCCCTTAATCTTGGAGAAGGTTAGGGTTTGGGTCCAGAGCATGGCCAAAGGTGGTCCTGTTAAGGAAGAATTGGAACCCAAGAAGGTTGCGCCGTCGTTGTCGCCGTCTCCGCCGACAACGACAACAACAACAACAACGACAACAACAACAACAACGACAACGACTGCTACGAAGAAGGAGGAGAAGAAAGAGAAGGAGAAGGAGAAGGAGAAGAAGGGGAGGAAGAGTATTGGCATGACGGAGAGGTTCAATTGCAGGGCCAAGGATTTGTATGAAATTTTGATGGATGAGAATAGGTGGAAGGGTTTTACACAGAGCAATGCGAGAATTAGTAAGGAGGTTGGCGGTGAGTTTAGCATTTTTGATGGGTCGGTGACCGGAACTAATTTGGAGTTGCAGGAGGCTAAGTTAATTGTTCAGAGATGGAGGTTTGGGAGCTGGAATGATGGAGTTCAATCCACAGTGAGGCTTGTGTTTGAGGAGCCTGAAGCCGGTGTTACGGTTGTTAAGCTGACACATACTGATGTGCCTGAAGAGGATAGGTATGGGAATGCTACCGTGGTGGAGAACACGGAAAGGGGATGGCGGGATCTTATTTTCCAGAGGATACGTGCGGTTTTTGGTTTTGGAATTTGA 1083 0.5235 MARYGEGDKRWIVEDRPDGTNVHNWHWSETNCLDWSKTFFSNLLSNLPILHGEANLFLKTTSLRSLDGEAYVNVRKGKIIPGYEISLTLNWQGEAKDSQGTSLLKVDGTVEIPYISDENADEDPEVRVTVNDEGPVGMRIKDAMLSKGKPLILEKVRVWVQSMAKGGPVKEELEPKKVAPSLSPSPPTTTTTTTTTTTTTTTTTATKKEEKKEKEKEKEKKGRKSIGMTERFNCRAKDLYEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEAKLIVQRWRFGSWNDGVQSTVRLVFEEPEAGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1241 360 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Gso19g1241 360 Gene3D - 223 359 IPR023393 -
Gso19g1241 360 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 360 IPR039981 GO:0001671|GO:0051879
Gso19g1241 360 Pfam Activator of Hsp90 ATPase homolog 1-like protein 236 356 IPR013538 -
Gso19g1241 360 Gene3D - 18 174 IPR036338 -
Gso19g1241 360 CDD SRPBCC_Aha1 225 358 - -
Gso19g1241 360 SUPERFAMILY Bet v1-like 227 359 - -
Gso19g1241 360 MobiDBLite consensus disorder prediction 183 204 - -
Gso19g1241 360 MobiDBLite consensus disorder prediction 169 224 - -
Gso19g1241 360 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Gso19g1241 360 MobiDBLite consensus disorder prediction 205 224 - -
Gso19g1241 360 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 360 - -
Gso19g1241 360 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1241 Gso-Chr19 40892515 40894014 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1241 - - gmx:100812897 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1241 19 40892515 40894014 Gso3g1238 3 38024539 38026214 GST
Gso19g1241 19 40892515 40894014 Gso2g1455 2 28402181 28405085 PCT
Gso2g1455 2 28402181 28405085 Gso19g1241 19 40892515 40894014 PCT