Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1237 ATGTCTGTTATAGGCGCGTATTCTCATTTTCTCTACGGAGAGGTTTACCAGAGAGATCAACAGTGCCCACAGTACTTGGTCAGTGGGAGGGGCTATTTTTTCTCTCACAAGAGTGGTTGTGGGAACATATGGGTTGGAAGCAGAAAGAGTGAAGGGAAGATTATTAAAAGGAGGAATTTTCGTGTGGAAGCTATGTGGCCAGATTTGTCAAGACCGAGTGAATTGGAGATGGAAGAAATTAATGATTCTGAGCAGCTTGATCAAATTCTTGTTCATGCCCAGCAGAACTCACAGCCTATCCTCATTGATTGGATGGCTACTTGGTGCCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCCCCTGAATATCAAGACAAAGTCAAATTTTATTTCGTGGATGTGAATAAAGTACCTCAGACTCTAGTCAAGCGTGGCAACATATCTAAAATGCCAACAATTCAGCTGTGGAAAGATGGAGAGATGAAAGAAGAAGTCATTGGAGGCCATAAGGCCTGGCTAGTTATTGAGGAAGTCAAAGAAATGATCCAAAAGTATTTATGA 570 0.4158 MSVIGAYSHFLYGEVYQRDQQCPQYLVSGRGYFFSHKSGCGNIWVGSRKSEGKIIKRRNFRVEAMWPDLSRPSELEMEEINDSEQLDQILVHAQQNSQPILIDWMATWCRKCIYLKPKLEKLAPEYQDKVKFYFVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKEEVIGGHKAWLVIEEVKEMIQKYL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1237 189 CDD TRX_family 84 186 - -
Gso3g1237 189 Gene3D Glutaredoxin 73 188 - -
Gso3g1237 189 ProSiteProfiles Thioredoxin domain profile. 60 189 IPR013766 -
Gso3g1237 189 SUPERFAMILY Thioredoxin-like 76 187 IPR036249 -
Gso3g1237 189 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 188 IPR044253 GO:0009570
Gso3g1237 189 Pfam Thioredoxin 94 174 IPR013766 -
Gso3g1237 189 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1237 Gso-Chr3 38019661 38022535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1237 - - gmx:100783648 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1237 3 38019661 38022535 Gso3g1237 3 38019661 38022535 ECH
Gso19g1240 19 40886510 40889380 Gso3g1237 3 38019661 38022535 GST