Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1240 ATGTCTGTGATAGGGGCGTATTCACATTTTCTCTACGGAGAGGTTTATCAGAAGGATCAACAGTGCCCACAGTACTTGGTGAGTGGGAGGGGATATTTGTTTTCTCACAAGAGTAGTTGTGGGAGCATATGGGTTGGAAGCAGAAAGAGTGAAGGTAAAATTAAAAGGAGGAATTTGCGTGTGGAAGCTATGTGGCCTGATTTGTCAAGACCGAATGAGTTAGAGATGGAAGAGATTAGTGATTCTGAGCAGCTTGATCAAATTCTTGTTCATGCCCAACAGAACTCACAGCCTATCCTCATTGATTGGATGGCTACTTGGTGCCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCCCCTGAATATCACAACAAAGCCAAATTTTATTTCGTGGATGTGAATAAAGTACCTCAGACTCTAGTCAAGCGTGGCAACATATCTAAAATGCCAACAATTCAGCTGTGGAAAGATGGAGAGATGAAAGCAGAAGTCATTGGAGGCCATAAGGCCTGGCTAGTTATGGAAGAAGTCAGAGAAATGATCCAAAAGTATTTATGA 567 0.4198 MSVIGAYSHFLYGEVYQKDQQCPQYLVSGRGYLFSHKSSCGSIWVGSRKSEGKIKRRNLRVEAMWPDLSRPNELEMEEISDSEQLDQILVHAQQNSQPILIDWMATWCRKCIYLKPKLEKLAPEYHNKAKFYFVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVMEEVREMIQKYL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1240 188 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 1 187 - -
Gso19g1240 188 ProSiteProfiles Thioredoxin domain profile. 59 188 IPR013766 -
Gso19g1240 188 CDD TRX_family 83 185 - -
Gso19g1240 188 Pfam Thioredoxin 93 172 IPR013766 -
Gso19g1240 188 Gene3D Glutaredoxin 72 187 - -
Gso19g1240 188 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 187 IPR044253 GO:0009570
Gso19g1240 188 SUPERFAMILY Thioredoxin-like 75 187 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1240 Gso-Chr19 40886510 40889380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1240 - - gmx:100811965 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1240 19 40886510 40889380 Gso3g1237 3 38019661 38022535 GST