Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1230 ATGGAGAAGATGGAGCATTTCAGCCACATCCACCCTCTACTGTTAAAGCAGGAACATAGCAATAATTACAACAACCAAGTCCTTTGTTCAGGTTGTGAAGAACTAATCTCATCAGGTCCTGTCTTCTGTTGTGTCCAATGCAACTATGTCCTTCACAAAAAATGCGCACAAATTGCACGCCATGTGAAACACCCATTTCACCCTCAACACCCCCTTGTTCTCCTTTCCACCACCCCTTATGAAGGACCATACGTATGTGATTCCTGTAGAGGCCTCTTCAGTAACTTCGTTTACCATTGTTATCAGTGCAACTACGACCTTGATGTCTCATGTGCTTCTCAGTTTAACCCTGATGATGGCCACAAGCATGAGTTTTTGTCACTGACAAATCCACAATCTTTTGTTTGTTATGCTTGTGGCATGTATGCAAACGAGGGTCTTGCTTGCTTATGCACCGTTTGTCAGATTTGGGTTCATTCTGGTTGTGCTGAATTACCTCTTGCTATTAGAATAAAAGGCCATGACCACCCTTTGAAGCTCACTTATACCCTTCATCATTTTTATGGTTTCTGGGGCAAGTTAACTTGTGGTTTTTGTAATGAAGCGATGAATCCAGCTTTTGCGGGTTACTTTTGCTCAACATGCAAATTTGCCGTGCATTGTCCGCAACAACATTTAGGAGAGTATGAAGATAAGGAATCATTCTCAGGCTATGAAACTGAGGAGGAATCTCAAGATATTGATTTCACTTTTAATTTCTTTGGTCATGAACATTTGTTGAAGTTCACGGAGGAATTAGAGAATGATGATGATGATGTGCAATGTTTTGATAAACTCTGTGATGCGTGCGTCCAACCCATCATGCCACCTTTCTTTTCCTGTGAAGAAGAAAATTGTGGCTTCTTTTTGCACCAAAGTTGTGCCGAATTACCAAGAACGAAGCAACACCCGTTTCACAAGCACCCTCTAACTCTTCAATCCAAGGCTCCTTATGATGGAATTTACAAGTGCGACGGATGCAGAAGATTGAGCAATGGTTTTGTTTACCGTTGTGACGTGTGTCAATTCGACCTTGACGTTTGTTGTGCTTCCCTTGAAGAGAGAATTGAACATGAAAGTCACAAGCATCCCTTGTTCCTCAAGAAGACAAGTGTTGCGAGGCAATGCAAAGGTTGTCATCTATGGTCGAAGCTTGTGTTTGTGTGTGATGTTTGTGAGGATTTTGCTATTGATTGTGGATGTGCTACTCTACTGAGTAAAGCGTGGCACGTGTATGACAAGCATCCTCTAAGTCTAAACTATTGGATTGAAGGGGATTTGAGGGAACATGAATGTGGCATTTGCAATGAGAAAATGTCTAAGAAGCAATGGTTTTATTGCTGTGATGATTGTGACTCTGGTGCTCACCCTTATTGTGTTGTTGGCAAGTTTAGGCGGATGAAGTTTGGAGGAAGTTTCCAATATGATGTTCACTCACACCCTCTTGCTCTGGTTGAAGAAACTGAGCAGAAGAATGAATGTGGAGCCTGTGGTGAACACTGCAATGGATGGACACTTGAATGTGGCCAATGCAAACGCTACTTTCACAGGGAAGGACAGTGTTTTTGGAAGGAATTTAAAAAGAGTGCTAAGTATTTGGAGTTATCAGGAATGATGAGACACAGGTATGCAGCAAACGTGTTGGCCTCCACGCCAAATGCAACCACAAAGTGA 1713 0.4227 MEKMEHFSHIHPLLLKQEHSNNYNNQVLCSGCEELISSGPVFCCVQCNYVLHKKCAQIARHVKHPFHPQHPLVLLSTTPYEGPYVCDSCRGLFSNFVYHCYQCNYDLDVSCASQFNPDDGHKHEFLSLTNPQSFVCYACGMYANEGLACLCTVCQIWVHSGCAELPLAIRIKGHDHPLKLTYTLHHFYGFWGKLTCGFCNEAMNPAFAGYFCSTCKFAVHCPQQHLGEYEDKESFSGYETEEESQDIDFTFNFFGHEHLLKFTEELENDDDDVQCFDKLCDACVQPIMPPFFSCEEENCGFFLHQSCAELPRTKQHPFHKHPLTLQSKAPYDGIYKCDGCRRLSNGFVYRCDVCQFDLDVCCASLEERIEHESHKHPLFLKKTSVARQCKGCHLWSKLVFVCDVCEDFAIDCGCATLLSKAWHVYDKHPLSLNYWIEGDLREHECGICNEKMSKKQWFYCCDDCDSGAHPYCVVGKFRRMKFGGSFQYDVHSHPLALVEETEQKNECGACGEHCNGWTLECGQCKRYFHREGQCFWKEFKKSAKYLELSGMMRHRYAANVLASTPNATTK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1230 570 SUPERFAMILY Cysteine-rich domain 395 481 IPR046349 -
Gso3g1230 570 Pfam C1 domain 7 56 IPR004146 -
Gso3g1230 570 Pfam C1 domain 65 112 IPR004146 -
Gso3g1230 570 Pfam C1 domain 255 308 IPR004146 -
Gso3g1230 570 Pfam C1 domain 317 363 IPR004146 -
Gso3g1230 570 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 534 - -
Gso3g1230 570 SUPERFAMILY Cysteine-rich domain 146 220 IPR046349 -
Gso3g1230 570 SMART PHD_3 28 90 IPR001965 -
Gso3g1230 570 SMART PHD_3 444 514 IPR001965 -
Gso3g1230 570 SMART PHD_3 135 216 IPR001965 -
Gso3g1230 570 SMART PHD_3 279 341 IPR001965 -
Gso3g1230 570 ProSitePatterns Zinc finger PHD-type signature. 29 103 IPR019786 -
Gso3g1230 570 SUPERFAMILY Cysteine-rich domain 291 376 IPR046349 -
Gso3g1230 570 ProSitePatterns Zinc finger PHD-type signature. 100 199 IPR019786 -
Gso3g1230 570 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 534 - -
Gso3g1230 570 SUPERFAMILY Cysteine-rich domain 36 114 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1230 Gso-Chr3 37940179 37942146 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1230 - - gmx:100784177 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1233 19 40813407 40815954 Gso3g1230 3 37940179 37942146 GST