Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1228 ATGATGGTGAAAGCAATTCAGCTTCAGATATGTGGATTGGTTAGTCAACGATGGAGTTGGAAACCCCGCACAGTCTCATCCCTGTCCTCATTTTCCTCAATTCCATACCCTAACCCTTATTCCAAACTGCTTCCCATCACCACCGTCGCTCGCTGGGTTCGATTCGTGCCATTTCACGCTTCCTCGTCGTCGCTTCCTTCTGCCGGGAATGTTCGAAACATTAAGTTCTGTCAGTGGTGTGGTGGTTCCACGAAGCATGATATTCCTGAAGGGGAGGAAAGGTTGAGAGCCATATGTACGGTTTGCGGGAAGATCGCATATCAGAATCCAAAGATGGTAGTTGGCTGCCTCATTGAACATGATAACAAGGTCCTTCTTTGCAAGAGGAGTATTCAACCATCTCATGGCCTTTGGACCCTTCCTGCTGGTTATTTGGAAATTGGAGAGTCTGCTGTGGAAGGTGCCATCAGGGAAACAAGGGAGGAAGCAAATGCAGACGTAGAAGTAATTTCTCCATTTGCCCAATTGGATATTCCTTTAATTGGCCAAAGTTACATGATATTCTTAGCAAAGCTGAAGAAGCACCATTTTTCACCTGGTCCAGAATCATCAGCATGCCAACTTTTTCCACTTGATGATATACCTTTCAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGGCTGGAAAACTCAAATTCCATTATGGAACCATTAACAAAAGAGTATCAGAAGATTGTAAGTTAAAAAATTTCTTCGGCCAGCCAGAAGATTGCATGTCTTCTGCAAGAACTTCCGAGTGTTAA 831 0.4332 MMVKAIQLQICGLVSQRWSWKPRTVSSLSSFSSIPYPNPYSKLLPITTVARWVRFVPFHASSSSLPSAGNVRNIKFCQWCGGSTKHDIPEGEERLRAICTVCGKIAYQNPKMVVGCLIEHDNKVLLCKRSIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQSYMIFLAKLKKHHFSPGPESSACQLFPLDDIPFNSLSFSSMVVTLSLYVEDIKAGKLKFHYGTINKRVSEDCKLKNFFGQPEDCMSSARTSEC* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1228 276 ProSiteProfiles Nudix hydrolase domain profile. 109 232 IPR000086 -
Gso3g1228 276 Pfam Nudix N-terminal 75 108 IPR029401 -
Gso3g1228 276 Pfam NUDIX domain 113 214 IPR000086 -
Gso3g1228 276 ProSitePatterns Nudix box signature. 143 164 IPR020084 GO:0016787
Gso3g1228 276 SUPERFAMILY Nudix 75 232 IPR015797 -
Gso3g1228 276 Gene3D - 72 108 - -
Gso3g1228 276 PANTHER BNAA03G19740D PROTEIN 60 252 - -
Gso3g1228 276 PANTHER NUDIX HYDROLASE 23 60 252 - -
Gso3g1228 276 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 109 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1228 Gso-Chr3 37929071 37933356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1228 K18453 - gmx:100783108 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1228 3 37929071 37933356 Gso3g1228 3 37929071 37933356 ECH
Gso19g1231 19 40799664 40804368 Gso3g1228 3 37929071 37933356 GST