Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1231 ATGACGGTGAAACCAATCCATCTTCAGATATGTGGATTGGTTAGTCAACGATGGAGTTGGAAACCCCGCACAGTCTCATCCCTCTCCTCATTTTCCCCAATTCCATACCCTAACCCTTATTCCAAACTGCTTCCCACCAACACCGTCGCTCGCAGGGTTCGATTCGCGCCATTTCACGCTTCCTCGTCGCCGCTTCCTTCTGCCGGTATTGTTCGAAACATCAAGTTCTGTCAGTGGTGTGGTGGTTCCACGAAGCATGATATTCCTGAAGGGGAGGAAAGGTTGAGAGCAATATGTACGGTTTGCGGGAAGATCGCGTATCAAAATCCGAAGATGGTAGTTGGCTGCCTCATTGAACATGATAACAAGGTCCTTCTTTGCAAGAGGAGTATTCAACCATCTCATGGCCTTTGGACCCTTCCTGCTGGTTATTTGGAAATTGGAGAGTCTGCTGTGGAAGGTGCCATTAGGGAAACAAGGGAGGAAGCAAATGCAGACGTAGAAGTAATTTCTCCATTTGCCCAATTGGATATTCCTTTAATTGGCCAAAGTTACATGATATTCTTAGCAAAGCTGAAGAAGCACCATTTTTCACCTGGTCCAGAATCATCGGCATGCCAACTTTTTCCACTTGATGATATACCTTTCAATTCTTTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGGCTGGAAAGCTCAAATTCCATTATGGAACCATTAACAAAAGGCCGGGTACAAGTCCTTCTGATATTCGTGCCTATACACTGGATCACCATATGCATTCATGA 810 0.4457 MTVKPIHLQICGLVSQRWSWKPRTVSSLSSFSPIPYPNPYSKLLPTNTVARRVRFAPFHASSSPLPSAGIVRNIKFCQWCGGSTKHDIPEGEERLRAICTVCGKIAYQNPKMVVGCLIEHDNKVLLCKRSIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQSYMIFLAKLKKHHFSPGPESSACQLFPLDDIPFNSLSFSSMVVTLSLYVEDIKAGKLKFHYGTINKRPGTSPSDIRAYTLDHHMHS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1231 269 ProSiteProfiles Nudix hydrolase domain profile. 109 232 IPR000086 -
Gso19g1231 269 Pfam NUDIX domain 113 214 IPR000086 -
Gso19g1231 269 ProSitePatterns Nudix box signature. 143 164 IPR020084 GO:0016787
Gso19g1231 269 Pfam Nudix N-terminal 75 108 IPR029401 -
Gso19g1231 269 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 109 260 - -
Gso19g1231 269 SUPERFAMILY Nudix 75 232 IPR015797 -
Gso19g1231 269 Gene3D - 72 108 - -
Gso19g1231 269 PANTHER BNAA03G19740D PROTEIN 64 268 - -
Gso19g1231 269 PANTHER NUDIX HYDROLASE 23 64 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1231 Gso-Chr19 40799664 40804368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1231 K18453 - gmx:100808417 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1231 19 40799664 40804368 Gso3g1228 3 37929071 37933356 GST