Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1169 ATGGCAGTGGGGAAGGAAGACGTGGAGATCGTGAAGGCGCGCATCGACAAGAGGGATTACAGAAGAGTCGTGCTCCGCAATTCGCTCCAAGTGCTCCTCATTAGCGATCCCGATACCGATAAGTGTGCTGCTTCAATGGACGTTGGCGTCGGTTACTTCAGCGACCCTGCTGGCCTCGAAGGCCTCGCCCATTTCCTCGAGCACATGCTGTTTTATGCGAGTGAAAAATACCCAGTTGAAGATAGCTACTCCAAGTATATTACTGAGCATGGAGGAAGCACCAATGCTTTTACATCTTCTGAACACACCAACTATTTTTTTGATGTTAACACAGATGGCTTTGAAGAGGCTCTGGACAGATTCGCTCAGTTCTTCAATAAACCATTGATGTCTGCCGATGCCACTATGAGGGAAATTAAAGCTGTTGACTCTGAAAACCAGAAGAATTTATTATCTGATGCATGGAGAATGAACCAGCTTCAGAAACATCTCAGTGATGAAGATCATCCGTATCATAAATTTAGTACAGGGAACTGGGACACTTTGGAAGTTAGACCAAAAGCAAAAGGATTAGATACAAGGAGCGAGCTTCTCAAATTCTATGAAGAAAACTATTCTGCTAATCTAATGCATCTAGTTATATACACAAATGAAAGCCTTGATAAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATTAGAAACATCAACAAAACTTGTTTCCGTGCTCGTGTTCAGCCGTGCAAATCAGAGCATTTGCAAATTCTTGTCAGGACTGTCCCAATAAAGCAAGGTCATAAATTGAGAATTGTATGGCCAGTAACCCCTGAAATTCATCATTACACTGAAGGGCCATGCAGGTATCTTGGTCATCTAATTGGTCATGAAGGAGAAGGGTCTTTATATTACATCTTGAAAAAATTGGGATGGGCTACGGCCTTGTATGCGGGCGAATCAGATTGGGGTTTGGACTTTTCTTTCTTTAAAGTTGTAATTGATCTTACTGATGTTGGTCATGAGCACATACAAGATATCATTGGGTTGTTGTTCAAATACATTGAGCTTCTACAACAGTCTGGTGTTTGCAAATGGATTTTTGAAGAGCTTTCAGCGGTTTGTGAGACCAAGTTTCATTATCAGGACAAAATTCGTCCTAGTGATTATGCTGTTAATATTGCATCAAATATGAAGTTTTATCCTGTAAAAGATTGGTTGACAGGATCATCCTTGCCTTCTAAATTTAGCCCAAATGTTATCCAAATGGTACTAGATCAGCTTTCTCCAAACAATGTTCGAATCTTTTGGGAGTCTAAAAAATTTGAAGGGCTTATGGATAAGGTAGAGCCATGGTATGGAACTGCATATTCCCTTGAAAAAATCACTGGCTCTGCAATTCAGGGGTGGGTGCTTTCTGCTCCAGATGAAAATATGCATCTTCCAGCTCCTAACAAATTCATTCCAACTGACTTGTCACTTAAAATTGTGCAAGAAAAAGTAAAGTTTCCAGTTTTGTTAAGCAGGTCTACTTATTCAGCCTTATGGTATAAGCCAGATACATTGTTTTCTACACCCAAGGCTTATGTAAAGATTGATTTCAATTGCCCATATTCTGGAAACTCTCCTGAGGCTGAAGTTTTGACGCATATTTTCACAGAGTTATTGATGGATTACTTGAATGAATATGCTTATTATGCTCAGGTTGCTGGTTTATATTACAGCATAAATCAAACAGATGGTGGTTTCCAGATGACTCTCCGTGGTTACAATCACAAGTTAAGGATTCTACTTGAAACTATAGTTGAAAAGATTGTGACATTTGAAGTGAAAACTGACAGGTTTTCAGTTATCAAGGAAATGGTAACCAAAGAATACCAGAATTTGAAGTACCAACAACCTTATCAGCAGGCTATGTACTATTGCTCTTTGATTTTACAAGATCAAACCTGGCCTTGGATAGAACAGCTAGACATACTTCCTGCTCTTCAAGTTGAAGATCTTGCTAAATTTGTACCAGCAATGCTCTCCAGGACCTTTTTAGAGTTTTATATAGCAGGGAACATTGAAAGCCATGAAGCACAGTCAATTGTTAAGCACATAGAAGATGTTCTCTTTAATTTTTCAAAACCTCTGTGCAAGCCTTTATTCTCATCTCAACATTTGGAAAATCGGGTTGTTAAACTTGAAAGTGGCATGAATTACTTCTACCCTTCAGAATGTCTTAATCCTGAAGATGAGAATTCTGCTCTTGTGCACTATATACAGGTTGGGCGAGATGACTTTAAGCTGAATGTTAAACTTCAGCTTTTTGCCCTTGTTGCAAAGCAACCAACCTTTCATCAGCTACGATCAGTTGAGCAGCTGGGGTACATTACTGTGCTCATGCAGAGGAATGATTGTGGCATACGTGGACTACAGTTTATTATCCAATCCACAGTAAAGTCTCCTGGTAACATTGAGCAAAGGGTCGAGGCATTTCTCCAAATGTTTGAGACCAAACTCCACGAGATGACAATTGATGAATTCAAGAGTAATGTAAATGCTTTGATAGATGTGAAGCTAGAGAAACACAAAAATTTGAGGGAAGAGTCATCATTTTTCTGGCGAGAGATTAATGATGGTACTTTGAGGTTTGATAGGACAGACTATGAGGTTGAAGCATTAAGGCAGCTCACTCTTCAAGAATTGATAGATTTCTTCAATGAATATGTCAAAGTTGGTGCACCTCGAAAGAAAACTTTAAGTGTACGAGTACATGGGAACCGTCATTCATCTGAATACAAAACGGAAGCCTCAGAACCACACTTGGCTAAAATAGACAATATCTTTACTTTTAGAAGATCACAGGCTCTTTATGGTTCATTTAAAGGACTTTCTGGGCAGATGAAATTATAG 2895 0.3924 MAVGKEDVEIVKARIDKRDYRRVVLRNSLQVLLISDPDTDKCAASMDVGVGYFSDPAGLEGLAHFLEHMLFYASEKYPVEDSYSKYITEHGGSTNAFTSSEHTNYFFDVNTDGFEEALDRFAQFFNKPLMSADATMREIKAVDSENQKNLLSDAWRMNQLQKHLSDEDHPYHKFSTGNWDTLEVRPKAKGLDTRSELLKFYEENYSANLMHLVIYTNESLDKIQNLVEEKFQDIRNINKTCFRARVQPCKSEHLQILVRTVPIKQGHKLRIVWPVTPEIHHYTEGPCRYLGHLIGHEGEGSLYYILKKLGWATALYAGESDWGLDFSFFKVVIDLTDVGHEHIQDIIGLLFKYIELLQQSGVCKWIFEELSAVCETKFHYQDKIRPSDYAVNIASNMKFYPVKDWLTGSSLPSKFSPNVIQMVLDQLSPNNVRIFWESKKFEGLMDKVEPWYGTAYSLEKITGSAIQGWVLSAPDENMHLPAPNKFIPTDLSLKIVQEKVKFPVLLSRSTYSALWYKPDTLFSTPKAYVKIDFNCPYSGNSPEAEVLTHIFTELLMDYLNEYAYYAQVAGLYYSINQTDGGFQMTLRGYNHKLRILLETIVEKIVTFEVKTDRFSVIKEMVTKEYQNLKYQQPYQQAMYYCSLILQDQTWPWIEQLDILPALQVEDLAKFVPAMLSRTFLEFYIAGNIESHEAQSIVKHIEDVLFNFSKPLCKPLFSSQHLENRVVKLESGMNYFYPSECLNPEDENSALVHYIQVGRDDFKLNVKLQLFALVAKQPTFHQLRSVEQLGYITVLMQRNDCGIRGLQFIIQSTVKSPGNIEQRVEAFLQMFETKLHEMTIDEFKSNVNALIDVKLEKHKNLREESSFFWREINDGTLRFDRTDYEVEALRQLTLQELIDFFNEYVKVGAPRKKTLSVRVHGNRHSSEYKTEASEPHLAKIDNIFTFRRSQALYGSFKGLSGQMKL* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1169 964 Gene3D - 2 238 - -
Gso3g1169 964 Gene3D - 726 959 - -
Gso3g1169 964 PANTHER ENZYME, PUTATIVE-RELATED 5 964 - -
Gso3g1169 964 SUPERFAMILY LuxS/MPP-like metallohydrolase 6 236 IPR011249 GO:0046872
Gso3g1169 964 SUPERFAMILY LuxS/MPP-like metallohydrolase 724 952 IPR011249 GO:0046872
Gso3g1169 964 Gene3D - 243 470 - -
Gso3g1169 964 PANTHER NARDILYSIN 5 964 - -
Gso3g1169 964 Pfam Middle or third domain of peptidase_M16 378 656 IPR032632 -
Gso3g1169 964 ProSitePatterns Insulinase family, zinc-binding region signature. 51 74 IPR001431 GO:0004222|GO:0006508
Gso3g1169 964 Gene3D - 499 725 - -
Gso3g1169 964 SUPERFAMILY LuxS/MPP-like metallohydrolase 484 708 IPR011249 GO:0046872
Gso3g1169 964 Pfam Peptidase M16 inactive domain 662 849 IPR007863 -
Gso3g1169 964 Pfam Peptidase M16 inactive domain 193 369 IPR007863 -
Gso3g1169 964 Pfam Insulinase (Peptidase family M16) 31 166 IPR011765 -
Gso3g1169 964 SUPERFAMILY LuxS/MPP-like metallohydrolase 246 483 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1169 Gso-Chr3 37205894 37220113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1169 K01408 - gmx:100804856 1951.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1169 3 37205894 37220113 Gso3g1169 3 37205894 37220113 ECH
Gso19g1167 19 40039347 40056129 Gso3g1169 3 37205894 37220113 GST