Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1167 ATGGCAGTGGGGAAGGAAGACGTGGAGATCGTGAAGGCGCGCATCGACAAGAGGGATTACAGAAGAGTCGTGCTCCGCAACTCGCTCCAAGTGCTCCTCATTAGCGATCCCGACACCGATAAGTGTGCTGCTTCCATGGACGTTGGCGTCGGTTACTTCAGTGACCCTGCTGGCCTCGAAGGCCTCGCCCATTTCCTCGAGCACATGCTGTTTTATGCGAGTGAAAAATACCCAGTTGAAGATAGCTACTCCAAGTATATTACTGAGCATGGAGGAAGCACCAATGCTTTTACATCTTCTGAACACACCAACTATTTTTTTGATGTTAACACAGATGGCTTTGAAGAGGCTCTGGACAGATTCGCTCAATTCTTCAATAAACCATTGATGTCTGCTGATGCCACTATGAGGGAAATTAAAGCTGTTGACTCTGAAAACCAGAAGAATTTATTATCTGATGCATGGAGAATGAACCAGCTTCAGAAACATCTCAGTGATGAAGATCATCCGTATCATAAATTTAGTACAGGGAACTGGGACACTTTGGAAGTTAGACCAAAAGCAAAAGGATTAGACACAAGGAACGAGCTTCTCAAATTCTATGAAGAAAACTATTCTGCTAATTTAATGCATCTAGTTATATACACGAATGAAAGCCTTGATAAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATTAGAAACATCAACAAAAGTTGTTTCCGTGCTCATGTTCAGCCATGCAAATCAGAGCATTTGCAGATTCTTGTCAAGACTGTCCCAATAAAGCAAGGTCATAAATTGAGAATAGTATGGCCAGTAACCCCTGAAATTCATCATTACACTGAAGGGCCATGCAGGTATCTTGGTCATCTGATTGGTCATGAAGGAGAAGGGTCTTTATATTACATATTGAAAAAATTGGGATGGGCTACGAGATTGTATGCTGGCGAATCAGATTGGAGTTTGGACTTTTCTTTCTTTAAAGTTGTAATTGATCTTACTGATGCTGGTCATGAGCACATACAAGATATCATTGGGTTGTTGTTCAAATACATTGAGCTTCTACAACGGTCCGGTGTTTGCAAATGGATTTTCGAAGAGCTTTCTGCGGTTTGTGAGACCAAGTTTCATTATCAGGACAAAATTCGTCCTAGTGATTATGTTGTTGATATTGCATCAAATATGCAGTTCTATCCTGTAAAAGGTTGGTTGACAGGATCATCCTTGCCTTCCAAATTTAGTCCAAGTGTTATCCAAATGGTACTGGATCAGCTTTCTCCAGACAATGTTCGAATCTTTTGGGAGTCTAAAAAATTTGAAGGGCTTACTGATAAGGTGGAGCCATGGTATGGAACTGCATATTCCCTTGAAAAAATCACTGGCTCTGCAATTCAGGGTTGGGTACTTTCTGCTCCAGATGAAAATATGCATCTTCCAGCTCCTAACAAATTCATTCCAACTGACTTGTCACTTAAAGTTGTGCAAGAAAAAGAAAAGTTTCCAGTTTTATTAAGCAGGTCAACTTATTCAGCCTTATGGTATAAGCCAGATACATTGTTTTCTACACCTAAGGCTTATGTAAAGATTGATTTCAATTGCCCATATTCTGGAAACTCTCCTGAGGCTAAAGTTTTGACACATATTTTCACAGAGTTATTGATGGATTACTTGAATGAATATGCTTATTATGCTCAGGTTGCTGGTTTATATTACAGCATAAGTCACACAGATGGTGGTTTCGAGGTGACTCTCCGTGGTTACAATCACAAATTAAGGATTCTACTTGAAACTATAGTTGAAAAGATTGCGACATTTGAAGTGAAAACTGACAGGTTTTCAGTTATCAAGGAAATGGTAACCAAAGAATACCAGAATTTCAAGTACCAACAACCTTATCAACAGGCTATGTACTATTGTTCTTTGATCTTACAAGATCAAACCTGGCCTTGGATAGAACAGCTAGACGTACTTCCTGCTCTTCAAGTTGAAGATCTTGCTAAATTTGTACCAGCAATGCTCTCCAGGACCTTTTTAGAGTTTTATATAGCAGGGAACATTGAAAGCCACGAAGCACCGTCAATGGTTAAGCACATAGAAGATGTTCTCTTTAATTGTTCAAAACCTCTGTGCAAGCCTTTATTCTCATCTCAACATTTGGCAAATCGGGTTGTTAAACTTGAAAGTGGCATGAATTACTTCTACCCTTCAGAATGTCTTAATCCTGAAAATGAGAATTCTGCTCTTGTGCACTATATACAGGTTGGTCGAGATGACTTTAAGCTGAATGTTAAACTTCAGCTTTTTGCCCTTGTTGCAAAGCAACCAACATTTCATCAGCTGCGATCAGTTGAGCAGCTGGGGTACATTACTGTGCTCATGCAGAGGAATTATTGTGGTATACATGGACTACAGTTTATTATCCAATCCACAGTAAAGTCTCCTGGAAACATTGAGCAAAGGGTCGAGGCATTTCTCCAAATGTTTGAGACCAAACTCCTCGAGATGACAGTTGATGAATTCAAGAGTAATGTAAATGCTTTGATAGATGTGAAGCTAGAGAAACACAAAAATTTGTGGGAAGAATCATCATTCTTCTGGCAAGAGATTAACTATGGTACTTTGAGGTTTGATAGGAAAGACTATGAGATTGAAGCATTAAGGCAGCTCACTCTTCAAGAATTGATAGATTTCTTCAATGAATATGTCAAAGTTGGTGCACCTCGAAAGAAAACTTTAAGTGTACGAGTACATGGGAACCGCCATTCATCTGAATACAAAGCAGAAGTCTCAGAACCACACTTGGCTAAAATAGATAATATCTGTACTTTTAGAAGATCACAGTCTCTTTATGGTTCATTTAAAGGACTTTCTGGGCAGATGAAATTATAG 2895 0.3924 MAVGKEDVEIVKARIDKRDYRRVVLRNSLQVLLISDPDTDKCAASMDVGVGYFSDPAGLEGLAHFLEHMLFYASEKYPVEDSYSKYITEHGGSTNAFTSSEHTNYFFDVNTDGFEEALDRFAQFFNKPLMSADATMREIKAVDSENQKNLLSDAWRMNQLQKHLSDEDHPYHKFSTGNWDTLEVRPKAKGLDTRNELLKFYEENYSANLMHLVIYTNESLDKIQNLVEEKFQDIRNINKSCFRAHVQPCKSEHLQILVKTVPIKQGHKLRIVWPVTPEIHHYTEGPCRYLGHLIGHEGEGSLYYILKKLGWATRLYAGESDWSLDFSFFKVVIDLTDAGHEHIQDIIGLLFKYIELLQRSGVCKWIFEELSAVCETKFHYQDKIRPSDYVVDIASNMQFYPVKGWLTGSSLPSKFSPSVIQMVLDQLSPDNVRIFWESKKFEGLTDKVEPWYGTAYSLEKITGSAIQGWVLSAPDENMHLPAPNKFIPTDLSLKVVQEKEKFPVLLSRSTYSALWYKPDTLFSTPKAYVKIDFNCPYSGNSPEAKVLTHIFTELLMDYLNEYAYYAQVAGLYYSISHTDGGFEVTLRGYNHKLRILLETIVEKIATFEVKTDRFSVIKEMVTKEYQNFKYQQPYQQAMYYCSLILQDQTWPWIEQLDVLPALQVEDLAKFVPAMLSRTFLEFYIAGNIESHEAPSMVKHIEDVLFNCSKPLCKPLFSSQHLANRVVKLESGMNYFYPSECLNPENENSALVHYIQVGRDDFKLNVKLQLFALVAKQPTFHQLRSVEQLGYITVLMQRNYCGIHGLQFIIQSTVKSPGNIEQRVEAFLQMFETKLLEMTVDEFKSNVNALIDVKLEKHKNLWEESSFFWQEINYGTLRFDRKDYEIEALRQLTLQELIDFFNEYVKVGAPRKKTLSVRVHGNRHSSEYKAEVSEPHLAKIDNICTFRRSQSLYGSFKGLSGQMKL* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1167 964 PANTHER ENZYME, PUTATIVE-RELATED 5 964 - -
Gso19g1167 964 SUPERFAMILY LuxS/MPP-like metallohydrolase 725 952 IPR011249 GO:0046872
Gso19g1167 964 Gene3D - 2 238 - -
Gso19g1167 964 Pfam Insulinase (Peptidase family M16) 31 166 IPR011765 -
Gso19g1167 964 Pfam Peptidase M16 inactive domain 662 849 IPR007863 -
Gso19g1167 964 Pfam Peptidase M16 inactive domain 193 369 IPR007863 -
Gso19g1167 964 PANTHER NARDILYSIN 5 964 - -
Gso19g1167 964 ProSitePatterns Insulinase family, zinc-binding region signature. 51 74 IPR001431 GO:0004222|GO:0006508
Gso19g1167 964 Gene3D - 243 470 - -
Gso19g1167 964 SUPERFAMILY LuxS/MPP-like metallohydrolase 245 483 IPR011249 GO:0046872
Gso19g1167 964 SUPERFAMILY LuxS/MPP-like metallohydrolase 6 236 IPR011249 GO:0046872
Gso19g1167 964 Pfam Middle or third domain of peptidase_M16 378 657 IPR032632 -
Gso19g1167 964 Gene3D - 726 959 - -
Gso19g1167 964 SUPERFAMILY LuxS/MPP-like metallohydrolase 484 708 IPR011249 GO:0046872
Gso19g1167 964 Gene3D - 498 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1167 Gso-Chr19 40039347 40056129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1167 K01408 - gmx:100788622 1964.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1167 19 40039347 40056129 Gso3g1169 3 37205894 37220113 GST