Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1146 ATGGCTTGGGATCTCTGGAGTTCGTCCTATGCCCAAGATTTCATAGAGGAGGATGCCTTGAATGTGGAATCCTGTGTTCGGGTTTTAAGAATTTTGATCACCAAGGCAGATACCGAGATTGAGGAACTTGAAAGGGATCTCTTGTTGCTTCAGAATGAATTGGCCTGCACCGAGCATGAAAAGTGGCCTGATATATGCTGTGCTGCTCTCACTGAGAGAATCAGCCGGCTTGATGTGGCGGTTAGCACTTTGAAGAATGATTATGCTGATGATGCAGAGATGCAGCCACTGTTAGATAAAGAACCTGCTGAGACACTTAATGAAATACTTGCCCAGTCTCTGGATATGAATATGTTGAGTCCAATTGTGAATGTTACTGGACATGCACTAGACAAGGATTCTAGCACTTTTGATTCTAATATAATCATTAAGGAGGAAGAAAAAGAACTCCATGGAACCTCTGAAAGCTCGGAACTTCTTTTGGAGCTTCATGAAAAGAGATCAGATAATCCTGAAAAGATTGAGGATTTGCCTGAAAAATCTCTTGTTAGAAGTCCTGATTTAGGAGCTATCATCTCTGATGAGACGAAATTATCAGAAACATTTGATAATGAAGTTACTGGTAATGAAGAAGTCAGAAAAAGCCAACTCATTAATACAGATATTGGTCAAATGTTGGATTTGTTTTCCACCAAAGATGATGGAAACATTCCAAGTGAAGTCAAGAAAGAAAATGAATTTGTCAAAGAAAATGATGTTAGCTTAGATGATTTTAGACCTGCAATTGGTGTCAAGGGGAGGAAAGAGTATCCTCATTCCAGGTTAGCTACTTCACAACAACGAAAAAGGGGACCTGATCACTCTCATTGGATGAAATTATCAGAAACATCTGATAATAAAGTTGCTGGAAATGAAGAAGTTGGAAGAAACCAACTCATCAATACAGATATAGGTCAAATCTTGGATTTGTTTTCTGCCAAAGACAATGAAAATATTCCAAGTGAAGTCAAGAAAGAAAGTGAGTTTGTCAAAGAAAAAGATGTTAGCTCAGATGATTTTAGACCTGCAATTGGCGTCAAGGGGAGGAAAGAGTATCCTCATTCCAGATTAGCTACTTCACAACAACAAAAAAGTGGACCTGAATCTCCTGATCACTCTGATTGGATGAAATTATCAGAAACATCTGATAAAGTTTCTGGAAATGAAGTTGAAAGAAGTCAACTCATTGATACAGATATAGGTCAAATATTGGATTTGTTTTCTGCCAAAGACAATGAAAATATTCCAAATGAAGCCAAGAAAGAAAATGAATTTGTCAAAGAAGATGTTAGCTCAGATGATTTTAGACCTGCAACTGACATCAAGGGGAGGAAAAAGTATCCTAATTCCAGATTAGCTACTTCACAACGGAAAAGTAGGAATTCCAATTTAGACAAAAAGGTATGTGATTTTGCTCCAGAAACTGCACAGAGAGCCTACAAGAAACAATCCAAGGTTGCTCCAGATGAAGATTTGAACTCTGTGGATTTACCTTTACAAGTTGTTTATCCTCAAACATTTTGTAGTGCTGATACTGAATTTTGCTCCTTTAAAGGAAGTAATGGGATTCAAACCAAGAGTACACTGAATACTGATTTACAGATGATAGATGAAGATGAAGAGGAACAAGAAGCACAAGACCTTAAGTCCCAAATTACTTCTGAATTCAGAAAATTGAACATGAGTTTCCCTTCAAAGCTAAAAGCTCGGGAAAAGCAGAAACTGGAACTAGAGGCATTTTCTTCCAGAGAACCATATGACAGTTGTACAGAAGTTATTCCAAGTACACCCATAATTGTATCAACCAAGAGGCAGCGAAGATCGAAACCCTGTACTGATGTTGCCATTTTAAATGAGCCCATGAACCGGAAGATTATTACTAGAAGAGCAGTGCAACCCGACAAGCATGAAACTGAAGGTCGTGCTCTTGTTCCTTATGATAGCAACTTCTCTGAATTACAAAAGAGAAGAAAAGCTTTAAAGTTGCCAATCACTGTGGACATGGAAACAAATTCAGACAGGGTTTCTATGGACAGCAGAAGCCAGTTAGTTCTTCATAGTAGCAACTTGCATTCCTTGGTGGATTCCCATGACGGGGCCTCATCTTTGCTGCCTGGTGACTTGAATAGCTTGTCATTGATTGATTTGAGGGCCATGGCAAAGGACCACAAAGTAAAACAGTACTATAAGCTTCGAAAAGGAGCTTTGGTTGAACAATTAGCTAAGCAGCTCAGTAGCTGCTGA 2283 0.3872 MAWDLWSSSYAQDFIEEDALNVESCVRVLRILITKADTEIEELERDLLLLQNELACTEHEKWPDICCAALTERISRLDVAVSTLKNDYADDAEMQPLLDKEPAETLNEILAQSLDMNMLSPIVNVTGHALDKDSSTFDSNIIIKEEEKELHGTSESSELLLELHEKRSDNPEKIEDLPEKSLVRSPDLGAIISDETKLSETFDNEVTGNEEVRKSQLINTDIGQMLDLFSTKDDGNIPSEVKKENEFVKENDVSLDDFRPAIGVKGRKEYPHSRLATSQQRKRGPDHSHWMKLSETSDNKVAGNEEVGRNQLINTDIGQILDLFSAKDNENIPSEVKKESEFVKEKDVSSDDFRPAIGVKGRKEYPHSRLATSQQQKSGPESPDHSDWMKLSETSDKVSGNEVERSQLIDTDIGQILDLFSAKDNENIPNEAKKENEFVKEDVSSDDFRPATDIKGRKKYPNSRLATSQRKSRNSNLDKKVCDFAPETAQRAYKKQSKVAPDEDLNSVDLPLQVVYPQTFCSADTEFCSFKGSNGIQTKSTLNTDLQMIDEDEEEQEAQDLKSQITSEFRKLNMSFPSKLKAREKQKLELEAFSSREPYDSCTEVIPSTPIIVSTKRQRRSKPCTDVAILNEPMNRKIITRRAVQPDKHETEGRALVPYDSNFSELQKRRKALKLPITVDMETNSDRVSMDSRSQLVLHSSNLHSLVDSHDGASSLLPGDLNSLSLIDLRAMAKDHKVKQYYKLRKGALVEQLAKQLSSC* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1146 760 MobiDBLite consensus disorder prediction 431 476 - -
Gso3g1146 760 MobiDBLite consensus disorder prediction 431 460 - -
Gso3g1146 760 MobiDBLite consensus disorder prediction 268 291 - -
Gso3g1146 760 Pfam Rho termination factor, N-terminal domain 720 757 IPR011112 GO:0006353
Gso3g1146 760 SMART Rho_N_2_a 720 759 IPR011112 GO:0006353
Gso3g1146 760 MobiDBLite consensus disorder prediction 343 389 - -
Gso3g1146 760 Coils Coil 26 60 - -
Gso3g1146 760 MobiDBLite consensus disorder prediction 343 367 - -
Gso3g1146 760 MobiDBLite consensus disorder prediction 368 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1146 Gso-Chr3 36827711 36833749 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1146 - - gmx:102666817 1425.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1146 3 36827711 36833749 Gso3g1146 3 36827711 36833749 ECH
Gso19g1143 19 39645322 39650271 Gso3g1146 3 36827711 36833749 GST