Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1143 ATGGCTTGGGATCTCTGGGGTTCGTCCTATGCCCAAGTTGCGAGTGGTAGTAATTACTGGTCACAGCATCCTGAATGTGACTTCTACTTTGGGTGTGGCCGTGATTTGATAGAGGAGGATGCCTTGAATGTGGAATCCTGTGTCCGGGTTTTGAGAATTTTGATCACCAAGGCAGATACCGAGATCGAGGAACTTGAAAGGGACCTCTTGTTTCTTCAGAATGAATTGGCCTGCGCCGAGCATGAAAAATGGCCTGATATATGCCGTGCTGTTCTCACTGAGAGAATCAACCGGCTTGATGTGGCGGTTAGCACTTTGAAGAATGATCATGCTGATGATGCGGAGATGCAGCCACTGTTAGATAGTGAACCTGCTGAGACACTTCATGAAATACTTGCTCAGTCTCTGGATATGAAAATGTTGAGTCCAATTGTGAATCTAGACAAGGATTCTAGCACTTTTGATTCTAATATAATCATTAAGGGGGAAGAAAAAGAACTCCATGGAACCTCTGAAAGCTCTGGAAGCTCAGAACTTCTTTTGGAGCTTCATGGAAAGAGATCAGATAATCCCGAAAAGATTGAGGAATTGTCTGAAAAATCTCTTGTTAGAAGTCCTGATTTGGGGGCTATCATCCATGCACCTGATCACTCTGTTGAGACAAAATTATCAGAAACATTTGATAATGACGTTACTGGAAATGAAGAAGTCAGAAGAAGTCAACACATTAGTACAGATATAGGTCAAGTGTTGGATTTGTTTTCTGCCAAAGACGATGAAAACATTCCAAATGGAGTCAAGAAAGGAAATGAATTTGTCAAAGAAAAAGATGTTAGCTCAGATGATTTTAGACCTGCAATTGGTGTCAAGGGGAGGAAAGAGTATCCTCATTCCAGGTTAGTTACTTCACAACAACGAAAAGGTGAACCTGATCACTCTGATTGGATGAAATTATCAGAAACATCTGATAGTAAACTTGCTGGAAATGAAGAGGTCGGAAGAAGCCAACTCATTAATACAAATATAGGTCAAATGTTGGATTTGTTTTCCGCCAAAGACAATGGAAATATTCCAAGTGAAGTCAAGGAAGAAAATGAAGTTGTCAAACAAAAAGATGTTAGCTCAGATGATTTTAGACCTGCAATTGGCATCAAGGGGAGGGAAGAGTATCCTCATTCCAGATTAGCTACTTCACAACAAAAAAGTGGACCTGAATCTCCTGATCACTCTGATTGGATGAAATTATCAGAAACATCTGATAATAAAGTTGCTGGAAATGATGTTGAAAGAAGCCAACTCAATGATACAGATATAGGTCAAATCTTGGATGTGTTTTCTGCCGAAGACAACGAAAATATTCCAAGTGAAGCCCAGAAAGAAAATGAATTTGTCAAAGATGTTAGCTCAGATGATTCCAGACCTGCAACTGACATCAAAGTGAGGAAAAAGTATCCTAATTCCAGATTAGCTACTTCACCTCAACGAAAATGTAGAAATTCTAATTTAGACAAAAAGCTATGTGATATTGCTCCAAAAACTGCACGGAAGGCCTACAAGAAACAGTCCAAGGTTGCTCCAGATAAAGATTTGAACTCCATGGATTTACCTTTACAAGTATTTTATCCTCAAACATTTTGTAGCGCCAATACTGAATTTTGCTCCTTTAAAGGAAGTAATGGGATTCAAACCAAGAGTGCCCTGTATACTGATTTACAGCTGATAGATGAAGATGAAGAGGAACAAGAAGCACAAGACCTTAAATCCCAAATTACTACTAAATTCAGAAAGTTGAACATGAGTTTCCCTTCAAAGCTAAAAGCTCGGGAAAAGCAGGAACTGGAACTAGAGGCATTTTCTTCCAGAGAACCATATGACAGTTGTACAGAAGTTATTCAAAGTACACCCATAATTGTATCAACCAAGAGGCAGCGAAGATCCAAACCCTGTAATGATGTTGCCATTTTAACTGAGCCGATGAACCGGAAGAAAATTTCTAGAAGGGCAGTGCAACCTGACAAGCATGAAACTGAAGGTGGTGCTATTGTTCCTTATGATAGCAACTTCTCTGAATTACAAAAGAGAAGAAAAGTTTCAAAGTTGCCAATCACCGTGGACATGGAAACAAATTCAGATAGGGTTTCTATGGACAGTGGAAGCCAGTTAGTTCTTCATACTAGCAAGTTGCATTCCTTGGTGGATTCCCATGATGGGACCTCATCTTTGCTGCCTGGTGACTTGAATAGCTTGTCATTGACTGATTTGAGGGCCATGGCAAAGGACCACAAAGTAAAACAGTACTATAAGCTTCGAAAAGGAGCTTTGGTTGAACAATTAGCTAAGCAGTTCAAAAGCTGCTGA 2358 0.3986 MAWDLWGSSYAQVASGSNYWSQHPECDFYFGCGRDLIEEDALNVESCVRVLRILITKADTEIEELERDLLFLQNELACAEHEKWPDICRAVLTERINRLDVAVSTLKNDHADDAEMQPLLDSEPAETLHEILAQSLDMKMLSPIVNLDKDSSTFDSNIIIKGEEKELHGTSESSGSSELLLELHGKRSDNPEKIEELSEKSLVRSPDLGAIIHAPDHSVETKLSETFDNDVTGNEEVRRSQHISTDIGQVLDLFSAKDDENIPNGVKKGNEFVKEKDVSSDDFRPAIGVKGRKEYPHSRLVTSQQRKGEPDHSDWMKLSETSDSKLAGNEEVGRSQLINTNIGQMLDLFSAKDNGNIPSEVKEENEVVKQKDVSSDDFRPAIGIKGREEYPHSRLATSQQKSGPESPDHSDWMKLSETSDNKVAGNDVERSQLNDTDIGQILDVFSAEDNENIPSEAQKENEFVKDVSSDDSRPATDIKVRKKYPNSRLATSPQRKCRNSNLDKKLCDIAPKTARKAYKKQSKVAPDKDLNSMDLPLQVFYPQTFCSANTEFCSFKGSNGIQTKSALYTDLQLIDEDEEEQEAQDLKSQITTKFRKLNMSFPSKLKAREKQELELEAFSSREPYDSCTEVIQSTPIIVSTKRQRRSKPCNDVAILTEPMNRKKISRRAVQPDKHETEGGAIVPYDSNFSELQKRRKVSKLPITVDMETNSDRVSMDSGSQLVLHTSKLHSLVDSHDGTSSLLPGDLNSLSLTDLRAMAKDHKVKQYYKLRKGALVEQLAKQFKSC* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1143 785 MobiDBLite consensus disorder prediction 384 426 - -
Gso19g1143 785 SMART Rho_N_2_a 745 783 IPR011112 GO:0006353
Gso19g1143 785 Pfam Rho termination factor, N-terminal domain 745 780 IPR011112 GO:0006353
Gso19g1143 785 Coils Coil 48 82 - -
Gso19g1143 785 MobiDBLite consensus disorder prediction 453 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1143 Gso-Chr19 39645322 39650271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1143 - - gmx:100782404 1522.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1143 19 39645322 39650271 Gso3g1146 3 36827711 36833749 GST