Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1143 ATGGCCCTCCCCACCAATCTCAAGTTCTTCTGTGTGTTTCTCCTAGTGCTTATTCTCTATTCCTCATCCTTCCTTGCATCAGCTGTTGATCCTAAGGCTGAAGATGAAGAATTTACCTTCGCTGAAGGAAGTATCAAAGGGCCAAAGAATTGGGGGCAGATCAACCCAAAATGGAAAGTATGTGGAGATGGAAAACTACAATCTCCCATTGATCTCTCTGACCAAATGGCTCAAGAGCTTCCTCAATTGGGTAAACTTGACAAAGTTTATAAACCAGCTCCTGTTGTCCTAATAAATAGGGGTCATGACATCATGCTGCAATGGAACGGGGATGCAGGCCAGCTTAACATAAATGGAACTTTCTACAATCTGATGCAATGTCATTGGCATACACCTTCAGAGCACACGTTGAATGGAACAAAGTTTGACTTGGAACTGCATGCAGTCCATAAAACCTCTAAAGGAGAGATTGCTGTTATTGGAATCTGGTATAAAATTGGCCATTCAGATCCCTTGCTTTCAAAGCTGCTCAATGACATAAAATCAATTAAGGACAAGAAGATAGACGTAGGAGTAATCAACCCAGGAGACATCATGTTTGAAACAAAAGAGTACTACAGATATGTTGGTTCTCTTACAACTCCACCATGCACTGAAGGTGTTGTTTGGACAATAGTGAAGGAGGTGAGGACAGTCTCAACCGAGCAATTGAATGCCTTGAAAGGAGCTGTCCATCATGGAGAGGAAAATGCAAGGCCAACACAAGAACTTGGTGGAAGACAAGTTTTGTTATATAAAGATGTGAATTGGGAATTGTGA 819 0.4176 MALPTNLKFFCVFLLVLILYSSSFLASAVDPKAEDEEFTFAEGSIKGPKNWGQINPKWKVCGDGKLQSPIDLSDQMAQELPQLGKLDKVYKPAPVVLINRGHDIMLQWNGDAGQLNINGTFYNLMQCHWHTPSEHTLNGTKFDLELHAVHKTSKGEIAVIGIWYKIGHSDPLLSKLLNDIKSIKDKKIDVGVINPGDIMFETKEYYRYVGSLTTPPCTEGVVWTIVKEVRTVSTEQLNALKGAVHHGEENARPTQELGGRQVLLYKDVNWEL* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1143 272 ProSitePatterns Alpha-carbonic anhydrases signature. 133 149 IPR018338 GO:0004089|GO:0008270
Gso3g1143 272 ProSiteProfiles Alpha-carbonic anhydrases profile. 36 266 IPR001148 -
Gso3g1143 272 SMART Carb_anhydrase_2a 40 266 IPR001148 -
Gso3g1143 272 Gene3D Alpha carbonic anhydrase 34 271 IPR036398 -
Gso3g1143 272 CDD alpha_CA_prokaryotic_like 47 264 IPR041891 -
Gso3g1143 272 Pfam Eukaryotic-type carbonic anhydrase 47 263 IPR001148 -
Gso3g1143 272 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 11 267 - -
Gso3g1143 272 SUPERFAMILY Carbonic anhydrase 43 263 IPR036398 -
Gso3g1143 272 PANTHER CARBONIC ANHYDRASE 11 267 IPR023561 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1143 Gso-Chr3 36800573 36805118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1143 K01674 - gmx:100306209 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1140 19 39618057 39622459 Gso3g1143 3 36800573 36805118 GST