Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1140 ATGACCCTCCCCACCAATCTCAACTTCTTCTATGTGTTCCTCCCAATGCTCATTCTCTATTCCTCTTCCTTCCTTGCATCAGCTTCTGATTCTAAAGCTGAAGATGAAAAATTTACCTACGCTATAGGAAGTAGCACAGGACCAGAGAATTGGTGGCGTGTCAACCAAAAATGGAAAACATGTGGGGATGGAAAACTACAATCTCCCATTGATCTGCTTGACCAAAGGGTTCAAGAGCTTCCTCAATTGGGTAAACTTAAGAAAGCTTACAAATCAGCTCCTGCTGTCCTAAAGAATAGTGGTCATGACATCGTGCTGGAATGGAAAGGAGATGCAGGCCATCTTAACATAAATGAAACTTACTACAATCTGATTCAATGTCATTGGCATACACCTTCAGAGCACACGTTGAATGGAACAAAGTTTGACTTGGAACTGCATGCAGTCCATAAATCCTCTAAGGGAGAGTTTGCTGTTATTGGAATATTGTATAAAATTGGTTCTCCAGATCCCTTTTTTTCAAAGCTGCTCAATGACATAAAATCAAGTGTGGACAAGGATATAGATGTAGGAGTAATCAACCCAAGAGAGATCAAGTTTAAAAGCAGACCGTACTACAGATATGTTGGTTCTCTTACAACTCCACCATGCACTGAAGGTGTTGTTTGGACAATTGTGAAGAAGGTCAGGACAATCTCAAGCGAGCAATTAAGTGCCTTGAAAGGAGCTGTTCATCATGGATATGAGGAAAATGCAAGGCCAACGCAGGAACTTGGTGGAAGACAAGTTTGGTTATATGGACCTATGGAGAATGAAAAGCCTACTTAA 828 0.4106 MTLPTNLNFFYVFLPMLILYSSSFLASASDSKAEDEKFTYAIGSSTGPENWWRVNQKWKTCGDGKLQSPIDLLDQRVQELPQLGKLKKAYKSAPAVLKNSGHDIVLEWKGDAGHLNINETYYNLIQCHWHTPSEHTLNGTKFDLELHAVHKSSKGEFAVIGILYKIGSPDPFFSKLLNDIKSSVDKDIDVGVINPREIKFKSRPYYRYVGSLTTPPCTEGVVWTIVKKVRTISSEQLSALKGAVHHGYEENARPTQELGGRQVWLYGPMENEKPT* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1140 275 ProSitePatterns Alpha-carbonic anhydrases signature. 133 149 IPR018338 GO:0004089|GO:0008270
Gso19g1140 275 SUPERFAMILY Carbonic anhydrase 38 264 IPR036398 -
Gso19g1140 275 Pfam Eukaryotic-type carbonic anhydrase 47 265 IPR001148 -
Gso19g1140 275 Gene3D Alpha carbonic anhydrase 34 272 IPR036398 -
Gso19g1140 275 CDD alpha_CA_prokaryotic_like 47 265 IPR041891 -
Gso19g1140 275 SMART Carb_anhydrase_2a 40 267 IPR001148 -
Gso19g1140 275 PANTHER CARBONIC ANHYDRASE 15 268 IPR023561 GO:0004089|GO:0008270
Gso19g1140 275 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 15 268 - -
Gso19g1140 275 ProSiteProfiles Alpha-carbonic anhydrases profile. 36 267 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1140 Gso-Chr19 39618057 39622459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1140 K01674 - gmx:100781864 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1140 19 39618057 39622459 Gso3g1143 3 36800573 36805118 GST