Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1141 ATGTCGTCATCCGCGGCGGTGCATCTCCAATCTCCGATCAACACCTCCTCTGACGCGCCGCCGCCGCCGCCGCCGCATTCTCCGTTCCTCCATTTCAATGCCGACTGCGTAAACCCTTCCGCCGCACGCACGAGGTCGAGGCCGAGGCTCGCCAAGCTGAGGAAGCAGTCTGCTTCGCAGCAGGCCCGGTCACGGAGCAGAACCGCCACCGGCGACGACGGCTCCGGCGCCGGCTTCAATCCGTTTCGCTCCGATCATCAGGTAAACGGTAATGTTAACAGTAGTGGAGTAGAGAGTGGTTCCGATGGTTTTGTGTTTGGGGCTGGGAAGGGCGATTCTGATTCCGCTAGGGATTTGAAGGGGCCGAGTGAGGGAGAAATTGGGGAGGGTGGCGGTGGTGTGGAATTTGTGTTTAGTGCTAAAAAACGGAGTGATGAAGATGAATTGAAAAAGAAAAATGAAAATGTTACAGAGGCGGTTTCTGGTGTTGAGAGGAAGGTGGTGTCGAATTCGGAGGGGGAGCAGGGGGAATTGAATGGTAGGGAGTTTGTTTTTGGTGCTTGTAGAAACAATTTGGATTCTGGTTTAAATACAGAAAAGGGGAAATCTGGTGTACGTGTGGGGGATTCGGGGTTTGATAGTGGTGGGGTGAGGGAATGTGAGACTGAATTTGAGTGTGGAAAGCGTGATAGTGTTAGTAATGTGGAGAAGCTGGAGCCTGTTGGCCGTGTGTGGAATTCGGAACGTGGAATGGGTGCTTTTGGTGTTAAGGTGGGAGTGAATGGTAATAGTGATACAGGTGCTGATCGGTGTGATCATTTGGGTGATGGTGGTAAGTGCGAGAATCGATATGGCAGTCTTAATGGTATTGCTGCTGCTTATAGTGACGTTCCAGTGATGCGCAATTTATCAGATGAGATGGAGAAACTGAACATCAAACATTCTGAGGGTGCTGATATTGCCAGAGATTCGGTGAATTCACATGCAAATGGTAGTGCTGGTTTTGTGTTTGGAGCAAGTGACAAGGCTTTTGGCTATTCTAGTGTTAGTTCAAGAACTGATGCCAGTGGTCAGCAGTCTTGTGCTCAGGCTACTTTTGAGAATATTGGTGGGCAATTTGCTAAAGCGGGTGGATTAAAAGGTGTTCAAAATGGAACTGCTGGTGGTGTTGCCTGTGGTTCTGCAGGAATACGTTGCTCTAAGCCATCCACTAGTCAGGAAACCATCAGAGATTTCCAGTGTGGCAAAATTCCAGAATGTAATGTGTCTGAAGATTCTAAAGTGAATGGAGCTGCAGCATCGTTTTCCTTTTCATCATTTGGTTTTGATTCCCATCCAAATAACCATGCTTCCATGGGCCATTCCTCAAGTGCAGATAATGATAAGGATGGAAATTGTTTTGCAAGTACTCCAGAGGCTTCCAAAGAGTCTTTTGCGGACTTCAAACCCCCAACATGGGATCCTTCTTGTTTCAAAGAAAATTTATTTCCTAAGTTAAATAAAAAAGTTGAATCCACAGCGAAGGACCGATCTTGTAAGGAAAAAGGATCAAAATGTATGAGGAGAAAATTGAAGCCGCATTCTGTAAATAAGAAACAGTCAGAGCTGGACCATTTGTTGAAGGAAAATGGTTCACAGAAAACCCCTGATTCTTCTGGTATCCACTCACCCATGGATTTTTCTCCTTATCAGGAAACAACAGCAAGTGATCATGCGAAAGCTTCTGAAAAATTAAATGATCTGCATTCAACAATTCCTACTGATCAATGCGGTAGTGTAGCAGGTGCTTCAGCAGGTGCTTCTGCAGATGCTGGGTTTGACTTCACCCCAAACACTGAAAAGCAAAAGGATGATGAATTTCGTTTTGTTCATGGTGTGAATGATTCAAAGGGGAAAGGTTTTGCATTTTTTGCTTCATCAGCTGTGGAGGGTACTCCATTAAAGCGTCAACAGAAGAAGAAATTTAGGAGAAAAATGGGGTGCGACTCTTTTGTTATCTCTCCTCGTGTGAATGGAAACTTTGTATCTTCTGTACAATTTTCTCCCCATAACACTGCCAACATGTCATCACATTCTGACGTACAATTCAAGGAATTGGATGTTGCATCATCGGATACAATTCCAGCAGCCTGCGACACATGGAGACTCAGGGGGAACCAAGCTCATAAAGATGGGGATCTTTCTAAAGCCGAGGACTTCTACTCTCGAGGAATAAATTCTGTCCCTTCAAGTGAAAGATCAGGATGCTGGGCTAAGCCTCTTTTACTGTGCTATAGTAACCGTGCAGCAACACGGATGAGTCTTGGAAGGATCAGAGAAGCTCTAGAGGATTGCATGATGGCTACAGCTCTGGACCCCTCCTTTATGAAAGTACAGATGAGAACTGCTAACTGTCACCTTTTGCTAGGGGAAGTAGAAAATGCTCAGCAGTGTTTTAATAAGTGCATGGAATCAGGTAATGCTGTTTGTTTGGATCGGAGGGTTATAGTTGAAGCAGCTGAAGGTTTACAGAAGGCTCAGGAAGTGGTCAAGTGTATAAATAATGCTGCTGAACTTTTAAAAGAGAGGACTTCTGATGCAGCTGTTACTGCTTTAGAACTAGCTTCTAAGGCATTGTCAATAAGTTTATACTCAGAAAAATTGCTTCAAATGAAGGCAGAGGCTCTATGTTTGCTACAAAAGTATGATGCCACAATTCAGCTTTGTGAACAGAGTCAGCATCTTGCAGAAAAGAATTTTGTCTTGACAAACAATGCAGAGAATTCTGATAGTTCCTTATGTGATAGTTACTCAAGTGTAAAATTGTGGAGGTGGTCATTGAAATCCAAGTGTTACTTTCGTTTGGGAAGGCTTGAAGCATCACTTAATGTTCTCGAGAAATTACAGCAAGTTGTGTCTGTCAATGACAAGTGTGTGATTGATAACATTGAAGACTTGCTGACATTAGCTTCTACAATACGAGAACTTCTGAACCACAAGAGGGCTGGAAATGAAAACTTTAAATCTGGAAAGTATATGGAAGCTGTTGAGAATTACACTGCTGCTTTATCTTGCAATGTTAAATCACGTCCTTTTATGGCAATTTGTTTCTGCAACCGTGCTGCAGCTCATCAATCTTTAGGCCAAATTGCCGATGCCATTGCGGACTGCAGTGTGGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCTTGCATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAAGAGACTTATAGCTGTCCTTGAAACTCAATCCAATGAAAGAGCCAAACAATCTGACTCACCCAGTGGATCTAATGGTGTGAAAGAATTAAGGCAAGCTCATCAACGTCTGCTTTCAGTGGAAGATCAAGCCAAAAAGGGAACACCCTTGGATGTTTACCTCATTTTAGGAATCAAATCAGCTGATACAGCAACAGATATCAAGAAGGCATACCACAAGGCAGCTCTCAGACATCATCCAGACAAGGCTGGTCAGTTGTTGGCTAGAAGTGAAGTTGGAGATGAAGGCCAACTTTGGAAGGAAATTTCACAGGAGGTGTACAAGGATGCTGATAAGCTTTTCAAAATGATCGGAGAAGCATATGCTGTGCTTTCAGACCCAGCCAAGCGCTCGGAGTATGATTTGGAAGAGGAGATAAGGAAAGCTTCTAAGTTATGTAACAGAGGTGGCACAAGCAGGAGATCTTCAGATGCTTATGGGTGTGGAAGATCTTCAGATGCGTATGGGTGTGGAAGACCGTTTGATGATTACAGATCTACCTCTGACAGAACTTCTAACAGACGAAATGGACGGGATCATTGGAAGACCCATGGACATTCGTATTCTCGATGGTAA 3867 0.4425 MSSSAAVHLQSPINTSSDAPPPPPPHSPFLHFNADCVNPSAARTRSRPRLAKLRKQSASQQARSRSRTATGDDGSGAGFNPFRSDHQVNGNVNSSGVESGSDGFVFGAGKGDSDSARDLKGPSEGEIGEGGGGVEFVFSAKKRSDEDELKKKNENVTEAVSGVERKVVSNSEGEQGELNGREFVFGACRNNLDSGLNTEKGKSGVRVGDSGFDSGGVRECETEFECGKRDSVSNVEKLEPVGRVWNSERGMGAFGVKVGVNGNSDTGADRCDHLGDGGKCENRYGSLNGIAAAYSDVPVMRNLSDEMEKLNIKHSEGADIARDSVNSHANGSAGFVFGASDKAFGYSSVSSRTDASGQQSCAQATFENIGGQFAKAGGLKGVQNGTAGGVACGSAGIRCSKPSTSQETIRDFQCGKIPECNVSEDSKVNGAAASFSFSSFGFDSHPNNHASMGHSSSADNDKDGNCFASTPEASKESFADFKPPTWDPSCFKENLFPKLNKKVESTAKDRSCKEKGSKCMRRKLKPHSVNKKQSELDHLLKENGSQKTPDSSGIHSPMDFSPYQETTASDHAKASEKLNDLHSTIPTDQCGSVAGASAGASADAGFDFTPNTEKQKDDEFRFVHGVNDSKGKGFAFFASSAVEGTPLKRQQKKKFRRKMGCDSFVISPRVNGNFVSSVQFSPHNTANMSSHSDVQFKELDVASSDTIPAACDTWRLRGNQAHKDGDLSKAEDFYSRGINSVPSSERSGCWAKPLLLCYSNRAATRMSLGRIREALEDCMMATALDPSFMKVQMRTANCHLLLGEVENAQQCFNKCMESGNAVCLDRRVIVEAAEGLQKAQEVVKCINNAAELLKERTSDAAVTALELASKALSISLYSEKLLQMKAEALCLLQKYDATIQLCEQSQHLAEKNFVLTNNAENSDSSLCDSYSSVKLWRWSLKSKCYFRLGRLEASLNVLEKLQQVVSVNDKCVIDNIEDLLTLASTIRELLNHKRAGNENFKSGKYMEAVENYTAALSCNVKSRPFMAICFCNRAAAHQSLGQIADAIADCSVAIALDGNYAKAISRRATLHEMVRDYEQAACDLKRLIAVLETQSNERAKQSDSPSGSNGVKELRQAHQRLLSVEDQAKKGTPLDVYLILGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSEVGDEGQLWKEISQEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEEIRKASKLCNRGGTSRRSSDAYGCGRSSDAYGCGRPFDDYRSTSDRTSNRRNGRDHWKTHGHSYSRW* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1141 1288 ProSitePatterns Nt-dnaJ domain signature. 1198 1217 IPR018253 -
Gso3g1141 1288 Coils Coil 146 166 - -
Gso3g1141 1288 SUPERFAMILY TPR-like 992 1089 IPR011990 GO:0005515
Gso3g1141 1288 MobiDBLite consensus disorder prediction 450 464 - -
Gso3g1141 1288 MobiDBLite consensus disorder prediction 1260 1288 - -
Gso3g1141 1288 MobiDBLite consensus disorder prediction 1231 1288 - -
Gso3g1141 1288 SUPERFAMILY Chaperone J-domain 1095 1217 IPR036869 -
Gso3g1141 1288 Gene3D Tetratricopeptide repeat domain 710 832 IPR011990 GO:0005515
Gso3g1141 1288 Gene3D Tetratricopeptide repeat domain 988 1104 IPR011990 GO:0005515
Gso3g1141 1288 MobiDBLite consensus disorder prediction 450 470 - -
Gso3g1141 1288 Pfam DnaJ domain 1135 1218 IPR001623 -
Gso3g1141 1288 MobiDBLite consensus disorder prediction 542 575 - -
Gso3g1141 1288 PRINTS DnaJ domain signature 1137 1155 IPR001623 -
Gso3g1141 1288 PRINTS DnaJ domain signature 1155 1170 IPR001623 -
Gso3g1141 1288 PRINTS DnaJ domain signature 1193 1213 IPR001623 -
Gso3g1141 1288 MobiDBLite consensus disorder prediction 1 15 - -
Gso3g1141 1288 SUPERFAMILY TPR-like 708 913 IPR011990 GO:0005515
Gso3g1141 1288 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 16 1288 - -
Gso3g1141 1288 MobiDBLite consensus disorder prediction 82 100 - -
Gso3g1141 1288 MobiDBLite consensus disorder prediction 1 134 - -
Gso3g1141 1288 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 16 1288 - -
Gso3g1141 1288 Gene3D DnaJ domain 1105 1236 IPR036869 -
Gso3g1141 1288 ProSiteProfiles dnaJ domain profile. 1135 1221 IPR001623 -
Gso3g1141 1288 SMART tpr_5 935 968 IPR019734 GO:0005515
Gso3g1141 1288 SMART tpr_5 989 1022 IPR019734 GO:0005515
Gso3g1141 1288 SMART tpr_5 1061 1094 IPR019734 GO:0005515
Gso3g1141 1288 SMART tpr_5 1027 1060 IPR019734 GO:0005515
Gso3g1141 1288 SMART tpr_5 711 744 IPR019734 GO:0005515
Gso3g1141 1288 SMART tpr_5 789 822 IPR019734 GO:0005515
Gso3g1141 1288 SMART tpr_5 755 788 IPR019734 GO:0005515
Gso3g1141 1288 SMART tpr_5 879 912 IPR019734 GO:0005515
Gso3g1141 1288 MobiDBLite consensus disorder prediction 545 569 - -
Gso3g1141 1288 MobiDBLite consensus disorder prediction 53 73 - -
Gso3g1141 1288 Coils Coil 836 856 - -
Gso3g1141 1288 CDD DnaJ 1135 1210 IPR001623 -
Gso3g1141 1288 SMART dnaj_3 1134 1213 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1141 Gso-Chr3 36783328 36796183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1141 K09527 - gmx:100809278 2492.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1135 19 39531456 39540366 Gso3g1141 3 36783328 36796183 GST