Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1135 ATGTCGTCATCCGCGGCGGTGCATCTCCAATCTCCGATAAACCATTCCTCCGACGCGCCGCCGCCGCATTCTCCGTTCCTCTATTTCAATGCCGACTGCTTAAACCCTTCCGCCGCCGCCGCTGCCTCCGCCGCGCGCACGAGGTCGAGGCCGAGGCTCGCCAAGCTGAGGAAGCAGTCCGCGTCGCAGCAGGCTAGGTCCTGGAGCAGAACCTCCGCCACCGGCCACGACAGCTCCGGCGCCTGCGCTGGCTTCAATCCGTTTCGCTCCGATCAGGTAACTACCGGTAATGTTAATAATAGTGGAGTAGAGAGTGGTTCCGATGGTTTTGTGTTTGCGGCTGGGAAGGGCGGTTCTGATTCCGCTAGGGATTTGAAGGGGCCGAGTGAGGGAGAAATTGGGAAGAGTGGTGGTGTGGAATTTGTGTTTAGTGCTAAAAAACGGAGTGAGGATGAATTGAAAAAGAAAAATGAAAATGTTGCAGAGGCGGTTTCTGGTGAGGGAAGGAAGGTGGTGTTGAATTCGGAGGGGGAGCAGGGGGAATCGAACACTAGGGAGTTAGTTTTTGGTGCTTGTAGAAACAATTTGGATTCTGGTTTGAATACAGAAAAGGGGGAATCTGGTGTGCCTGTGGGGGATCCGGGGTTTGATAATGGCGGGGTGAGGGAATGTAAGACTGAATTGGAGTGTGGAAAGCGTGATTGCAGTGCTAATAATGTGGAGAAGCCGGAGCATGTTGGTAGTGTGTGGAATTCAGATTGTGGAATGGGTGCTTTTGGTGTTAAGATGGGAGGGAACGGTAATAGTGATGCAGGTGCTGATCGGTGTGATCATTTGGGTGATGAGTGCGAGAGTCGATATGACAGTCTTAATGGTATTGCTGCTACTTATTGTGATGTGCCAGTGCGTAATTTATCAGATGGGATGGAGAAACTGAACATCAAACATTCTGAGGGTGCTGATATTGCCAGAGATTCGGCGAATTCACATGGAAATGGTAGTGCTGGTTTTGTGTTTGGAGCAAGTGACAAGGTTTTTGGCTATTCTAGTGTTAGTTCAAGAACTGATGCTGATGGTCAGCAGTCTTGTGCTCAGGCTACTTATGAGAATATTGGTGGGCAATTTGCCAAAGTGGGTGCATTAAATGGTGTTCAAAATCGAACTGCTTGTGGTGTAGCCCGTGGTTCTGCAGGAATACATTGCTCTAAGCCATCCACTTGTCAGGAAGGCACCAGAGATTTCCAGTGTGGCAAAATTCCAGAATGTAATGTGTCTGAAGATTTAAAAGTGAATGAAGCTGCAGCATCGTTTTCCTTTTCACCATTTGGTTTTGATTCCCATCCAAATAATCATGCTTCCATGGGCCATTCCTCAAGTGCAGATAATGATAAGGACAGAAATTGTTTTGCAAGTACTCCAGAGGCTTCCAAAGAGTCTTTTGCGGACTTCAAACCCCCAACATGGGATCCTTCTTGTTTCAAAGAAAATTTATTTCCCAAGTTAAATAAAAAAGTGGAATCCACACCGAAGGGCCGATCTTGTAAGGAAAAAGGGTCAAAATGTATGAGGAAAAAAATGAAGCCGCATTCTGTAAATAAGAAACAGTCAGGGCTATACCATTTGTCGAAGGAAAATGGTTCACAGAAAACCCCTGATTCTTCTGGTATCCACTCACCCATGGATTTTTCTCCCTATCAGGAAACAACAGCAAGTGATCGTGTGAAAGCTTCTGAAAAATTAAATGATCTGCATTCAACAATGCCTACTGATCGAAGTGGTAGTGCAGCAGGTGCTTCAGCAGATGCTGGGTTTGACTTCATCCCAAACACTGAAAAGCAAAAGGATGATGTATTTCGTTTTGTTCATGGTGTGAATGATTCAAAGGGGAAAGGTTTTGCATTTTCTGCTTCATCATCTGTGGATGGTACTCCTTCATTAAAGCGTCAACAGAAGAAGAAATTTAGGAGAAAAATGGGATGCAACTCTTTTGTTAACTCTCCTCGTGTGAATGGAAACTTTGTATCTTCTGTACAATTTTCTCCACATAACCCTGCCAACATGTCATCACATTCTGATTTACAATTCAAGGAAGGGGATGTTGCATCATTGGATACAATTCCAGCAGCCTGTGACACATGGAGACTCAGGGGGAACCAAGCTCATAAAGATGGGGATCTTTCTAAAGCGGAGGACCTTTACTCTCGAGGAATAAATTCTGTCCCTTCAAGTGAAAGATCAGGATGCTGGGCTAAGCCTCTTTTACTATGCTATAGTAACCGCGCAGCAACACGAATGAGTCTTGGAAGGATCAGAGAAGCTCTAGAGGATTGCATGATGGCTACAGCTCTGGACCCCACCTTTATGAAAGTACAGATGAGAACTGCTAACTGCCACCTTTTGCTAGGGGAAGTAGAAACTGCTCATCAGTGTTTTAATAAGTGCATGGAATCAGGTAGTGTTGTTTGTTTGGATCGAAGGGTTATAGTTGAAGCAGCTGAAGGTTTACAGAAGGCTCAGGAAGTGGTCAAGTGTATAAATTATGCTGCTGAGCTATTAAAAGAGAGGACTTCTGATGCAGCTGCTACTGCTTTAGAACTAGTTTCTAAGGCATTGTCAATAAGTTTATACTCAGAAAAATTGCTTCTAATGAAAGCAGAGGCTCTATGTTTGCTACAAAAGTATGATGCAGCAATTCAGCTTTGTGAACAGAGTCAGCATCTTGCAGAAACGAATTTTGTCTTGTCAAACAATACAGAGAATTCTGATAGTTCCTTATGTGATAGTTACTCAAGTGTAAAATTGTGGAGGTGGTCATTGAAATCCAAGTGTTACTTTTGTTTGGGAAGGCTTGAAGCATCACTTAATGTTCTTGAGAAATTACAGCAAGTTGTGTCTATCACTGACAAGTGTGTTGTCAATAACATTGAAGACTTGCTGACATTAGCTTCTACAATACGGGAACTTCTGAAGGACAAGAGAGAAGGAAATGAAAACTTTAAATCGGGAAAGTATATGGAAGCTGTAGAGAATTACACTTCTGCTTTATCATGCAATATAAAATCACGTCCTTTTATGGCGATTTGTTTCTGCAACCGTGCTGCAGCTCATCAAGCTTTGGGCCAAATTGCTGATGCCATTGCGGACTGCAGTGTGGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCTTGTATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAAGAGACTTATAGCTGTTCTTGAAACTCAATCCAATGAAAGAGCCAAACAATCTGACTCGCCCAGTGGATCTAATGCTGTGAAAGAATTAAGGCAAGCTCATCAACGTCTGCTTTCAGTGGAAGATCAAGCCAAAAAGGGAACACCCTTGGATGTTTACCTCATTTTAGGAATCAAATCAGCTGATACAGCAACAGATATCAAGAAGGCATACCACAAGGCAGCTCTCAGACATCATCCAGACAAGGCTGGTCAGTTGTTGGCTAGAAGCGAAGTTGGAGATGAAGGCCAACTTTGGAAGGAAATTTCACAGGAGGTGTACAAGGATGCTGATAAGCTTTTCAAAATGATTGGAGAAGCGTATGCCGTGCTTTCAGACCCAGCCAAGCGCTCGGAGTATGATTTGGAAGAGGAGATAAGGGAAGCTTCTAAATTATGTAACAGAGGTGGGGCAAGCAGTAGATCTTCAAATCCTTATGGGTGTGGAAGACCGTTTGGCTTTGATAGTTACAAATCTCCCTCTGACAGAACTTCTAACAGACGAAATGGACGGGATCATTGGAAGACCCATGGACATTCATATTCTCGATGGTAA 3843 0.4411 MSSSAAVHLQSPINHSSDAPPPHSPFLYFNADCLNPSAAAAASAARTRSRPRLAKLRKQSASQQARSWSRTSATGHDSSGACAGFNPFRSDQVTTGNVNNSGVESGSDGFVFAAGKGGSDSARDLKGPSEGEIGKSGGVEFVFSAKKRSEDELKKKNENVAEAVSGEGRKVVLNSEGEQGESNTRELVFGACRNNLDSGLNTEKGESGVPVGDPGFDNGGVRECKTELECGKRDCSANNVEKPEHVGSVWNSDCGMGAFGVKMGGNGNSDAGADRCDHLGDECESRYDSLNGIAATYCDVPVRNLSDGMEKLNIKHSEGADIARDSANSHGNGSAGFVFGASDKVFGYSSVSSRTDADGQQSCAQATYENIGGQFAKVGALNGVQNRTACGVARGSAGIHCSKPSTCQEGTRDFQCGKIPECNVSEDLKVNEAAASFSFSPFGFDSHPNNHASMGHSSSADNDKDRNCFASTPEASKESFADFKPPTWDPSCFKENLFPKLNKKVESTPKGRSCKEKGSKCMRKKMKPHSVNKKQSGLYHLSKENGSQKTPDSSGIHSPMDFSPYQETTASDRVKASEKLNDLHSTMPTDRSGSAAGASADAGFDFIPNTEKQKDDVFRFVHGVNDSKGKGFAFSASSSVDGTPSLKRQQKKKFRRKMGCNSFVNSPRVNGNFVSSVQFSPHNPANMSSHSDLQFKEGDVASLDTIPAACDTWRLRGNQAHKDGDLSKAEDLYSRGINSVPSSERSGCWAKPLLLCYSNRAATRMSLGRIREALEDCMMATALDPTFMKVQMRTANCHLLLGEVETAHQCFNKCMESGSVVCLDRRVIVEAAEGLQKAQEVVKCINYAAELLKERTSDAAATALELVSKALSISLYSEKLLLMKAEALCLLQKYDAAIQLCEQSQHLAETNFVLSNNTENSDSSLCDSYSSVKLWRWSLKSKCYFCLGRLEASLNVLEKLQQVVSITDKCVVNNIEDLLTLASTIRELLKDKREGNENFKSGKYMEAVENYTSALSCNIKSRPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKAISRRATLYEMVRDYEQAACDLKRLIAVLETQSNERAKQSDSPSGSNAVKELRQAHQRLLSVEDQAKKGTPLDVYLILGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSEVGDEGQLWKEISQEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEEIREASKLCNRGGASSRSSNPYGCGRPFGFDSYKSPSDRTSNRRNGRDHWKTHGHSYSRW* 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1135 1280 MobiDBLite consensus disorder prediction 535 571 - -
Gso19g1135 1280 SUPERFAMILY TPR-like 993 1089 IPR011990 GO:0005515
Gso19g1135 1280 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 29 1280 - -
Gso19g1135 1280 PRINTS DnaJ domain signature 1136 1154 IPR001623 -
Gso19g1135 1280 PRINTS DnaJ domain signature 1154 1169 IPR001623 -
Gso19g1135 1280 PRINTS DnaJ domain signature 1192 1212 IPR001623 -
Gso19g1135 1280 CDD DnaJ 1134 1209 IPR001623 -
Gso19g1135 1280 MobiDBLite consensus disorder prediction 1257 1280 - -
Gso19g1135 1280 ProSiteProfiles dnaJ domain profile. 1134 1220 IPR001623 -
Gso19g1135 1280 Gene3D Tetratricopeptide repeat domain 987 1112 IPR011990 GO:0005515
Gso19g1135 1280 Gene3D Tetratricopeptide repeat domain 709 824 IPR011990 GO:0005515
Gso19g1135 1280 SUPERFAMILY Chaperone J-domain 1092 1216 IPR036869 -
Gso19g1135 1280 SMART tpr_5 754 787 IPR019734 GO:0005515
Gso19g1135 1280 SMART tpr_5 788 821 IPR019734 GO:0005515
Gso19g1135 1280 SMART tpr_5 1060 1093 IPR019734 GO:0005515
Gso19g1135 1280 SMART tpr_5 988 1021 IPR019734 GO:0005515
Gso19g1135 1280 SMART tpr_5 710 743 IPR019734 GO:0005515
Gso19g1135 1280 SMART tpr_5 1026 1059 IPR019734 GO:0005515
Gso19g1135 1280 SMART tpr_5 878 911 IPR019734 GO:0005515
Gso19g1135 1280 MobiDBLite consensus disorder prediction 1228 1280 - -
Gso19g1135 1280 ProSitePatterns Nt-dnaJ domain signature. 1197 1216 IPR018253 -
Gso19g1135 1280 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 29 1280 - -
Gso19g1135 1280 Pfam DnaJ domain 1134 1217 IPR001623 -
Gso19g1135 1280 Gene3D DnaJ domain 1120 1235 IPR036869 -
Gso19g1135 1280 MobiDBLite consensus disorder prediction 517 531 - -
Gso19g1135 1280 SMART dnaj_3 1133 1212 IPR001623 -
Gso19g1135 1280 MobiDBLite consensus disorder prediction 40 84 - -
Gso19g1135 1280 MobiDBLite consensus disorder prediction 504 572 - -
Gso19g1135 1280 MobiDBLite consensus disorder prediction 56 79 - -
Gso19g1135 1280 MobiDBLite consensus disorder prediction 1 22 - -
Gso19g1135 1280 MobiDBLite consensus disorder prediction 450 473 - -
Gso19g1135 1280 MobiDBLite consensus disorder prediction 1 17 - -
Gso19g1135 1280 SUPERFAMILY TPR-like 707 911 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1135 Gso-Chr19 39531456 39540366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1135 K09527 - gmx:100778106 2494.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1135 19 39531456 39540366 Gso3g1141 3 36783328 36796183 GST