Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1116 ATGAGGCGCCAGCAGCTACACTTCGCGGCAGTTGTCGCGGCGATTGTCGTCACCGCTTGGGTTGCGCACATGCGCGGCGGGGTTGGCCAATCGGAGGCCAAGGGTTGGCAGTTCGAGGCCGTTCCGATTGACGGCGCCGTCGGACCGGAGAGCTTCTCCTTCGATCCTCGCGGCGAAGGCCCTTACACCGGCGTTTCTGACGGTAGAATCATCAAATGGCACCAAACGCAGAATCGTTGGCTCAACTTTTCCGCTATTGCTTCTTCTTCACACTGGGATGAAGAGTGTGGAGGACCATGTGATGAGCATTCCAAGAAAGAGCACGTGTGTGGGCGTCCACTAGGCTTGTGCTTTAGTACACTATCGAATGATCTTTACATTGCTGATTCTTACAAGGGCTTAGTTGTTGTTGGTCCCCATGGTGGCACTACTAGAAGACTCGTATCAACAATAGAAGGTGAACCCTTGGCTTTTACTAACGGTTTGGATGTTGACCAACGAACTGGAGCAGTGTACTTCACCAGTAGTAGTTCAAAATATCCGAGGAGGAATTACATGTCGTTGATCCTAAGCAGAGATAAGACGGGGATGCTAATGAAATATGAGCCACAAAGTGAACAAGTTAGCGTTCTCCTAAAGAATCTCTCCTATGCAAATGGAGTAGCATTAAGCAAAGATGGTGAATATATCCTAATAATTGAGACCACAACTTGTAGAGTATTAAGGTATTGGCTAGAAACACCAAAAACTGGAACCTTGGAAGTCTTTGCTGATCTACCAGGTTTCCCAGACAACATCAAACGGAGTCCAAGAGGAGGATTTTGGGTGGGAATTTACTCAAGAAGAGAAAAAATTATCCAATGGATTCTATCATATCCTTGGATTGGAAAAGTTTTGCTTAGGCTTCCTTTGGACATCCCAAAAGCTTATTCATATTTGGCTAAGCTAAAAAGGAGTAATGGAATGGCAATTAGACTAAGTGAGCAGGGTGATATATTAGAAATTGTTAACGAAAAAAATGGGAGCATAGGGAGGTCTATTAGTGAAGTGGAGGAAAGAGATGGGATATTATGGGTGGGATCCATAGATGCACCTTTTGTTGGTAAGTATAATATTCATGTTGTAGAAGGGCAAGTCAAACGGATTTGA 1149 0.4508 MRRQQLHFAAVVAAIVVTAWVAHMRGGVGQSEAKGWQFEAVPIDGAVGPESFSFDPRGEGPYTGVSDGRIIKWHQTQNRWLNFSAIASSSHWDEECGGPCDEHSKKEHVCGRPLGLCFSTLSNDLYIADSYKGLVVVGPHGGTTRRLVSTIEGEPLAFTNGLDVDQRTGAVYFTSSSSKYPRRNYMSLILSRDKTGMLMKYEPQSEQVSVLLKNLSYANGVALSKDGEYILIIETTTCRVLRYWLETPKTGTLEVFADLPGFPDNIKRSPRGGFWVGIYSRREKIIQWILSYPWIGKVLLRLPLDIPKAYSYLAKLKRSNGMAIRLSEQGDILEIVNEKNGSIGRSISEVEERDGILWVGSIDAPFVGKYNIHVVEGQVKRI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1116 382 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Gso3g1116 382 SUPERFAMILY Calcium-dependent phosphotriesterase 38 372 - -
Gso3g1116 382 Pfam Strictosidine synthase-like, N-terminal 38 73 - -
Gso3g1116 382 PANTHER STRICTOSIDINE SYNTHASE-RELATED 4 368 - -
Gso3g1116 382 Gene3D - 38 379 IPR011042 -
Gso3g1116 382 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 4 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1116 Gso-Chr3 36411977 36416853 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1116 - - gmx:100789150 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1116 3 36411977 36416853 Gso3g1116 3 36411977 36416853 ECH
Gso19g1110 19 39233991 39237868 Gso3g1116 3 36411977 36416853 GST