Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1110 ATGAACACAGGGCTCGTTGCAGGTGCAGCCTTGCTTGCACTCTTGGCTATCACCTTCTCCTTGTTGAACCCTCAAACCCTGTTTTCTCCGCCTCATGTTCCGGGCTCGAAGGATCACCTTCACGCTGCTCGGTTGCTCCATGTCACCGGAGCCGTCGGGCCGGAGAGTCTTGTCTTCGACGCCGACGGCGGAGGGCCCTACACCGGCGTCGCCGATGGCCGGATTCTCAAGTGGGAAGGGGAAGAGCGAGGTTGGACTGAATTTGCTGTCACAAGTTCCAATAGGTCGGACTGTGTACGCCCATTTGCACCAGAGTTGGAGCACATTTGTGGGAGGCCATTAGGACTAAGATTTGACAAGAAAAATGGAGATCTGTACATTGCTGATGCCTACCTAGGCCTAAAAGTAGTGGGGTCTGCAGGGGGTTTGGCCACCGAAGTGGTAACAGAAGTTGAAGGTCAGCCCTTGCAGTTCACCAATGACATGGACATCAGTGAAGATGAAGAAGTGATATACTTCACTGATTCAACCACAATCTTCCAGAGAAGGCAATTTATGCTTGTACTCCTAAGTGGAGACAAGACTGGCCGGTTAATGAAATACAACAAGTCAACAAAAGAAGTGACGGTCTTATTACGCGGCCTTGCTTTTCCCAATGGTGTTGCTTTAAGCAAAGACGGATCATTCGTTCTGGTAGCAGAAACCACTACTTGCAGGATCTTGCAGCTTTGGCTTCGTGGACCTAAGGCTGGCCATGTGGATACATTTGCAGTTCTGCCTGGCTTTCCAGACAATGTGAGAAGAAATTCACAAGGGCATTTCTGGGTGGCTCTGCATGCAAAGGGAAGTCGTTTCGCGAAGTGGGTTTCTTCCAATCCATGGGCGGGAAAGGCGTTGCTTAAGATTGGATTTAACTTCAAGCAGTTGCACTCATCATTTGCAGGGTGGAAGCCTCATGCTGCTGCTGTAAAGCTGAGTGATAAAGGAGAGATATTAGAAGTCTTGGAAGATTGTGATGGGAAGACCTTGAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGGAAGCTTTGGATTGCATCAGTGTTGATGCCTTTCATTGGCATTTATGGTTTATAA 1116 0.4884 MNTGLVAGAALLALLAITFSLLNPQTLFSPPHVPGSKDHLHAARLLHVTGAVGPESLVFDADGGGPYTGVADGRILKWEGEERGWTEFAVTSSNRSDCVRPFAPELEHICGRPLGLRFDKKNGDLYIADAYLGLKVVGSAGGLATEVVTEVEGQPLQFTNDMDISEDEEVIYFTDSTTIFQRRQFMLVLLSGDKTGRLMKYNKSTKEVTVLLRGLAFPNGVALSKDGSFVLVAETTTCRILQLWLRGPKAGHVDTFAVLPGFPDNVRRNSQGHFWVALHAKGSRFAKWVSSNPWAGKALLKIGFNFKQLHSSFAGWKPHAAAVKLSDKGEILEVLEDCDGKTLKFISEVEEKDGKLWIASVLMPFIGIYGL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1110 371 Gene3D - 37 370 IPR011042 -
Gso19g1110 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 4 369 - -
Gso19g1110 371 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
Gso19g1110 371 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 10 4 369 - -
Gso19g1110 371 SUPERFAMILY Calcium-dependent phosphotriesterase 19 366 - -
Gso19g1110 371 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1110 Gso-Chr19 39233991 39237868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1110 - - gmx:100815025 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1110 19 39233991 39237868 Gso3g1116 3 36411977 36416853 GST