Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1105 ATGATAAATATGGATACTTTGCTCAAAACACCCAACAAGCTTGAGTTTTTGCACCCACTTCACGGTTACTCGGAAAAATTGAGCAGTTCAGGTTCCTCTAGGGTGCAAAATCAGTATTTTGGGTTTGGTTCCAAGAAACCAACTGTGAGATGGGGTAAATGTGGTAACTTGAGGGCTAGTAGCAGTGCCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAGAATCTGGATTTTGAACTTCCTTTGTATGATTCCTCAAAGGGTGCTATGGTTGATCTTGCTGTTGTGGGAGGGGGCCCTGCAGGGCTTGCAGTTGCACAGCAGGTTTCTGAGGCGGGGCTTTCGGTTTGTGCCATTGATCCAAACCCTAGATTGATTTGGCCCAATAATTATGGGGTTTGGGTGGATGAGTTTGAGGCCATGGATTTGCTTGATTGCCTTGACACCATTTGGTCTGGCGCGGTTGTCTTCATTGACGACAAAACAAAGAAGGATCTAGATAGGCCTTATGGGAGGGTCAACAGGAAGCTGCTGAAGTCCAAGATGCTGCAGAAATGCATATCGAATGGCGTCAAGTTTCACCAAGCGAAAGTTATCAAGGTTATTCATGAGGAGGCCAAATCTTTGTTGATTTGTAATGATGGTGTCACTGTTCATGCCACTGTGGTTCTCGATGCAACTGGCTTTTCGAGATGCCTTGTTCAGTATGATAAACCGTATAATCCGGGATACCAAGTTGCTTATGGGATTTTGGCCGAGGTTGATGAACACCCATTTGATGTAGATAAAATGCTTTTTATGGACTGGAGAGATTCACATCTGGACAATGACATGGAACTGAAGCAGAGAAATAGTAGAATACCCACTTTTCTATATGCGATGCCCTTTTCATCCACTAAGATATTTCTTGAAGAAACTTCTCTTGTGGCACGCCCTGGGTTGCGAATGGATGATATACAAGAAAGAATGGCTGCTAGGTTGAAACACTTGGGTATTAGAGTGAAAAGCATTGAAGAAGATGAGCATTGTGTCATTCCAATGGGTGGCCCCCTCCCAGTTCTCCCCCAAAGAGTTGTTGGAATTGGCGGTACCGCAGGAATGGTGCATCCTTCAACAGGGTATATGGTAGCAAGGACCCTAGCTGCGGCTCCTATTGTTGCTAATTCTATTGTTCAGTGCCTTGGTTCTGATAGAGGTTTTTCAGGAGATGAAATATCTGCACAAGTGTGGAAAGATTTATGGCCTATCCAAAGGAGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAGCTTGATTTACCAGGCACAAAGAGATTTTTTGATGCGTTTTTTGATCTGGAACCTCATTACTGGCATGGATTCTTATCATCAAGACTGTTTCTTCATGAGCTCTTATTTTTTGGACTCTCTCTATTTTCTTATGCTTCTAATACATCTAGGGTAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGGTAAAAGATACAGAATAA 1524 0.4311 MINMDTLLKTPNKLEFLHPLHGYSEKLSSSGSSRVQNQYFGFGSKKPTVRWGKCGNLRASSSALLELVPEFKKENLDFELPLYDSSKGAMVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTIWSGAVVFIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEEAKSLLICNDGVTVHATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDNDMELKQRNSRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQERMAARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQCLGSDRGFSGDEISAQVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTKRFFDAFFDLEPHYWHGFLSSRLFLHELLFFGLSLFSYASNTSRVEIMAKGTLPLVNMINNLVKDTE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1105 507 Gene3D - 88 431 IPR036188 -
Gso3g1105 507 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 507 - -
Gso3g1105 507 TIGRFAM carotene-cycl: lycopene cyclase family protein 92 487 IPR010108 GO:0016117|GO:0016705
Gso3g1105 507 Pfam Lycopene cyclase protein 92 484 - -
Gso3g1105 507 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 507 - -
Gso3g1105 507 SUPERFAMILY FAD/NAD(P)-binding domain 90 474 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1105 Gso-Chr3 36293188 36295172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1105 K06443 - gmx:100783830 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1100 19 39107795 39109827 Gso3g1105 3 36293188 36295172 GST