Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1087 ATGCTTTACTTCCTCATATCTTTCGTCTCCTTTCTCATCCTTTCCAAGTCTTTCACCAGCAGGCCTTTCTCATCAGGGGAGAGAGGGATCAAACCAGGGTCAATTGGGTTTTGGGGGAGTCTTTCAAGTTGGTTAGTTTCTAGGCTCAAGAAAGGAAGCACAACAGGCACCACCCCTTTTAGTTTTTTTCAGTTTTCTCTTGGCATGTCATTGAAAAAGAATAGTTTAGTGTCTAAGGTGGAGAGTGAGGAGGAGGAGGGGAATGTTTCTCTCTTGGATTTGCCTGATTTGCCATTGGAATGCATCCTTGAGCACCTTTCACCAGCTGAATTATGCAGGGTGGCAACAGTGTGCACATCTCTGAGGGATAGATGTAGGAGTGATCATTTATGGAAGAAACACATGGAGAGGAAATGGGGTAAGGTGTTTGGTGATGCTGCTTATAGGCAATGGAAATGGCATGTAGCTTCCAAGAACAGAGAAAAAATCTCCTCCAACCCGCACAATCAGAAAGGAATATTTGCTTTCCTTCGTGGTGGTTTTCTCCCCTTCATATGGATCAAAGCAAAATCAGAAAAGGGCACAGAGTCAAGTAGCTCATTACCAGAAGATTCAATAGCAGCTTTATATCTTTCTCTTGAAAGTGGCAAATTTTGGTTCCCTGCTCAAGTCTATAACCGTGAGAATGGTCATGCTGGGTTCATGCTCTCATGTTATGATGCCCAACTATGCTATGATTCTCGATCCGACACTTTTCTGGCAAGGTACTCGCCTCATGGGAGATGGACAACTGAGGAAAACATACAATGGGACCGGCTAAGAGTGCCACCAATTGCTACTTCTCCACATGCTCTTCACATCTCTGACTGTTTGGATGACTTGAGACCTGGAGATCACATTGAGATTCAGTGGAGAAGAAACAAAGAATTTCCTTATGGTTGGTGGTATGGTGTCATTGGTCATTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCACTATAATGATATAGTGATTTTGGAGTTCACACAGTACACTGCTGGGTCCAGATGGAGACAAACCGTGATAAACAGAAAGCATCATATAGAAAAAGGCAATGAAATAGATGGTTTTTATGGAGGAATCAGGAAGCTGCATAGCAAGGAAGAAATTGCAAGGTGGAAGAACCTCTGGCCAACTAAAATTGTGATACATGATTGA 1206 0.4303 MLYFLISFVSFLILSKSFTSRPFSSGERGIKPGSIGFWGSLSSWLVSRLKKGSTTGTTPFSFFQFSLGMSLKKNSLVSKVESEEEEGNVSLLDLPDLPLECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVFGDAAYRQWKWHVASKNREKISSNPHNQKGIFAFLRGGFLPFIWIKAKSEKGTESSSSLPEDSIAALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLARYSPHGRWTTEENIQWDRLRVPPIATSPHALHISDCLDDLRPGDHIEIQWRRNKEFPYGWWYGVIGHLEQCQGHGNHCHCHYNDIVILEFTQYTAGSRWRQTVINRKHHIEKGNEIDGFYGGIRKLHSKEEIARWKNLWPTKIVIHD* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1087 401 ProSiteProfiles F-box domain profile. 88 134 IPR001810 GO:0005515
Gso3g1087 401 PANTHER ESTS AU081301(E20138) 1 398 - -
Gso3g1087 401 SMART fbox_2 94 134 IPR001810 GO:0005515
Gso3g1087 401 Pfam F-box domain 91 133 IPR001810 GO:0005515
Gso3g1087 401 PANTHER F-BOX-LIKE PROTEIN 1 398 - -
Gso3g1087 401 Gene3D - 74 166 - -
Gso3g1087 401 SUPERFAMILY F-box domain 90 160 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1087 Gso-Chr3 35981328 35984338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1087 - - gmx:100778469 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1087 3 35981328 35984338 Gso3g1087 3 35981328 35984338 ECH
Gso19g1084 19 38824519 38827732 Gso3g1087 3 35981328 35984338 GST