Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1084 ATGCTTTACTTCCTTATATCTTTTGTCTCCTTTCTCATCCTTTCCAAGTCCTTCACCAGTAAGCCTTTCTCATCAGGGGAGAGAGGGATCAAATTAGGGTCAATTGGGTTTTGGGGGAGCCTTTCAAGTTGGTTAGTTTCTAGGCTCAGGAAAGGAAGCACAAGCACCCGTTTTAGTTTTCTTCAGTTTTCTCTTGACATGTCATTGAAAAATAATAGTTTAGTGTCTAAGGGGGAGAATGAGGAAGAGGAGGTGAAGGTTTCTCTCTTGGATTTGCCCGATTTGCCATTGGAATGCATCCTTGAGCACCTTTCACCAGCTGAATTATGCAGGGTGGCAACAGTGTGCACATCTCTTAGGGATAGATGTAGGAGTGATCATTTATGGAAGAAACACATGGAGAGGAAATGGGGTAAGGTGTTTGGTGATGCTGTTTATAGGCAATGGAAATGGCAGGTAGCTTCCAAGACCAGAGAAAAGATCTCCTCCAACCAGCACAATCAGAAAGGAATATTTGCTTTCCTTAATGGTGGTTTTCTACCCCTCCTATGGATCAAAGCAAAATCAGAAAAGGGCACACAGTCAAATAGCTCATTATCAGAAGATTCAATCGCAGCTCTATATCTTTCTCTTGAAAGTGGCAAATTTTGGTTCCCCGCTCAAGTCTATAACCGTGAGAATGGTCATGCTGGATTCATGCTCTCATGTTATGATGCCCAACTTTGCTATGATTCTCGATCTGACACTTTTCTGGCAAGGTACTCACCTCATGGCAGATGGACAACTGAGGAAAACATACAATGGGACCGGCTGAGAGTGCCACCAATAGCCTCTTCTCCACATGCTCTTCACATATCTGATTGTTTGGATGACTTGAGACCTGGAGATCACATTGAGATTCAGTGGAGAAGAAACAAAGAGTTCCCTTATGGTTGGTGGTATGGTGTCATTGGTCATTTGGAACAATGTCAAGGACATGGGAACCATTGCCATTGTCATTACAGTGATATGGTGATTTTGGAGTTCACACAGTACAGTGCTGGATCCAGATGGAGACAAACCGTGATAAACAGAAAGCATCATGTAGAAAAAGGCAATGAAATAGATGGTTTTTATGGAGGAATCAGGAAGCTGCATAGCAAGGAAGAAATTACAAGGTGGAAGAACCTCTGGCCAACTAAAATTGTGATACATAACTGA 1200 0.4258 MLYFLISFVSFLILSKSFTSKPFSSGERGIKLGSIGFWGSLSSWLVSRLRKGSTSTRFSFLQFSLDMSLKNNSLVSKGENEEEEVKVSLLDLPDLPLECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERKWGKVFGDAVYRQWKWQVASKTREKISSNQHNQKGIFAFLNGGFLPLLWIKAKSEKGTQSNSSLSEDSIAALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLARYSPHGRWTTEENIQWDRLRVPPIASSPHALHISDCLDDLRPGDHIEIQWRRNKEFPYGWWYGVIGHLEQCQGHGNHCHCHYSDMVILEFTQYSAGSRWRQTVINRKHHVEKGNEIDGFYGGIRKLHSKEEITRWKNLWPTKIVIHN* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1084 399 SUPERFAMILY F-box domain 89 158 IPR036047 GO:0005515
Gso19g1084 399 PANTHER F-BOX-LIKE PROTEIN 1 396 - -
Gso19g1084 399 ProSiteProfiles F-box domain profile. 86 132 IPR001810 GO:0005515
Gso19g1084 399 PANTHER ESTS AU081301(E20138) 1 396 - -
Gso19g1084 399 Pfam F-box domain 89 131 IPR001810 GO:0005515
Gso19g1084 399 SMART fbox_2 92 132 IPR001810 GO:0005515
Gso19g1084 399 Gene3D - 75 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1084 Gso-Chr19 38824519 38827732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1084 - - gmx:100806109 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1084 19 38824519 38827732 Gso3g1087 3 35981328 35984338 GST