Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1080 ATGATAACTTTGTGGGACTTGTACCACGTTCTGACCGCGGTGGTGCCGCTCTACGTGGCGATGATCCTGGCCTACGGGTCCGTGAAGTGGTGGAAGATCTTCACCCCTGACCAATGCTCCGGCATAAACCGCTTCGTGGCACTCTTCGCAGTCCCACTCCTCTCCTTCCACTTCATCTCCACCAACAACCCTTATGCCATGAACTACAAGTTCATCGCCGCAGACTCGCTCCAGAAAGCCATAGTCCTCGCAGTGCTCTTGGTGTGGTCAAGAACTAGCTCAAGAGGCTCACTTGAATGGTCCATAACACTCTTCTCTCTCTCAACACTCCCCAACACGTTGGTAATGGGTATCCCATTGCTGAAGGGGATGTACGGTGATGCCTCGGGAACACTCATGGTTCAGATTGTGGTGCTTCAGTGTATTATTTGGTACACCCTTATGCTGTTTTTGTTTGAGTACAGGGGCGCGAGGCTTCTTATAGTGGAGCAGTTTCCTGATACTGCGGCTTCGATTATTTCATTCAAGGTTGATTCGGATATTATTTCGTTGGATGGGAAGGAGCCGCTTCAGACGGAGGCGGAGGTTGGTGATGACGGGAAGCTTCATGTGACGGTGAGGAAGTCGGCGAGTTCGCGGTCGGAGATTTTCTCTAGGCGCTCTCATGGCCCCAACTCGGTGTCGTTGACTCCGAGGCCTTCGAATTTGACCAATGCGGAGATTTACTCGCTGCAGAGCTCGAGGAACCCGACTCCGAGAGGCTCGAGTTTTAACCACACGGATTTTTACTCCATGGTGAATGGTAAGAACAACAACAACAACAACGTGAGTATGAGTCCGAGGCAGAGTAATTTTGGAGGCTTTGATGAAGAAAGTGGTGGGGGTGTGAGGGTGAATGGTGGTGCTGGTGTAGGTGGGTACCCTGGGCCTGCGAATGCGGGGATTTTTTCTCCGGTGGCGGCGAAGAAGAAGGGTGGTGAGAGTGGTGGTGGAGGGAAGGATCTCCACATGTTTGTGTGGAGTTCGAGTGCTTCGCCGGTGTCGGAAGGTGGAATCCATGTCTTCAGAGGTGGTGGTGGGGATTATGGGAGTGACCAGCTTCCTGTTGGTGGGGTGGCTCACCAGAAAGATTATGATGAGTTTGGTCACGATGAGTTTAGCTTCGGGAACAGAACCGTTGCTAATGGGGTTGACAAGGAAGGGCCAGTGCTTTCAAAGCTTGGCTCGAGTTCCACAGCTGAGCTTCGCCCTAAAGCTCAAGGTGAAGCCAAACCTACTTCCATGCCACCAACAAGTGTTATGACAAGGCTCATTTTGATTATGGTTTGGAGGAAGCTGATTAGGAACCCCAACACATATTCCAGCCTCTTTGGTCTCACTTGGTCTTTGATCTCATTCAAATGGAATGTTGTTATGCCAGCAATTGTTGCTAAATCGATATCAATTTTATCTGATGCTGGTCTAGGGATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAGCCAAAGATTATTGCGTGTGGAAACTCGGTTGCTTCCTTTGCTATGGCAGTTCGTTTTCTTACTGGTCCTGCAGTCATGGCTGTTGCTTCAATCGTAGTAGGGCTCAGGGGAGTTCTGTTGCACATTGCTATCGTACAGGCTGCTCTGCCTCAAGGGATTGTTCCTTTTGTGTTTGCTAAGGAATATAACGTTCATCCTGACATACTAAGCACGGGGGTTATATTTGGGATGCTAATTGCTCTTCCTATTACTCTAGTTTACTACATTTTGCTTGGACTTTGA 1788 0.4955 MITLWDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADSLQKAIVLAVLLVWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAASIISFKVDSDIISLDGKEPLQTEAEVGDDGKLHVTVRKSASSRSEIFSRRSHGPNSVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNNNNNNVSMSPRQSNFGGFDEESGGGVRVNGGAGVGGYPGPANAGIFSPVAAKKKGGESGGGGKDLHMFVWSSSASPVSEGGIHVFRGGGGDYGSDQLPVGGVAHQKDYDEFGHDEFSFGNRTVANGVDKEGPVLSKLGSSSTAELRPKAQGEAKPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVVMPAIVAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1080 595 MobiDBLite consensus disorder prediction 400 429 - -
Gso3g1080 595 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 595 - -
Gso3g1080 595 MobiDBLite consensus disorder prediction 213 232 - -
Gso3g1080 595 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 595 - -
Gso3g1080 595 TIGRFAM 2a69: auxin efflux carrier 1 595 IPR014024 -
Gso3g1080 595 Pfam Membrane transport protein 9 590 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1080 Gso-Chr3 35896779 35900194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1080 1 586 Organic Solute Cotransporters AT1G73590 65.156 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1080 K13947 - gmx:100820506 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1080 3 35896779 35900194 Gso3g1080 3 35896779 35900194 ECH
Gso19g1077 19 38715188 38718658 Gso3g1080 3 35896779 35900194 GST