Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1077 ATGATAACGTTGTTGGACTTGTACCACGTTCTGACAGCGGTGGTGCCGCTCTACGTGGCGATGATCCTCGCCTACGGCTCCGTGAAGTGGTGGAAGATCTTCACCCCGGACCAATGCTCGGGAATAAACCGGTTCGTGGCACTCTTCGCAGTGCCCCTCCTCTCCTTCCACTTCATCTCCACCAACAACCCCTACGCCATGAACTACAAGTTCATCGCCGCGGACACACTCCAAAAAGCCATAGTCCTCGCAGTGCTCTTGGTTTGGTCCAGAACAAGCTCAAGAGGCTCACTTGAATGGTCCATAACACTCTTCTCTCTCTCAACTCTCCCCAACACCTTGGTGATGGGTATCCCGTTGCTGAAGGGCATGTACGGTGATGACTCGGGAACACTAATGGTTCAGATTGTGGTGCTTCAGTGTATCATCTGGTATACCCTTATGTTGTTTCTTTTCGAGTATAGGGGTGCGAGGCTTTTAATAGTGGAGCAGTTTCCTGATACAGCGGGTTCGATTATCTCCTTCAAGGTTGATTCGGATATTATTTCGTTGGATGGGAAGGAGCCGCTTCAGACGGAGGCGGAGGTTGGTGATGATGGGAAGCTTCACGTCACGGTGAGAAAGTCGGCGAGTTCGCGGTCGGAGATTTTTTCTAGGCGCTCGCACGGTGGCCTGAACTCGGTGTCGTTGACTCCGAGGCCTTCCAACTTGACCAATGCGGAGATTTACTCGCTGCAGAGCTCCAGGAACCCCACGCCCAGAGGCTCGAGTTTTAACCACACGGATTTTTACTCCATTGTGAATGGTGGTGGTGGGAGGAACAACAACGTGAGTGTGAGTCCGAGGCAGAGTAATTTCGGGGCGTTTGATGAGGAGAGTGGTGGGGGTATGAGGGTGAATGGTGGGTACCCTGGGCCTGCGAATGCGGGGATTTTTTCTCCGGTGGCGAAGAAGAAGGGTGGTGAGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGGAAGGATCTGCACATGTTCGTGTGGAGTTCCAGTGCTTCGCCGGTGTCGGAGGGTGGTATCCATGCCTTTAGAGGTGGTGGGGATTACGGGAGTGACCAGCTTCCCGTTTGTGGGGTGGCTCACCAGAAAGATTATGATGAGTTTGGTCACGATGAGTTTAGCTTCGGGAACAGAACCATTGCTAATGGGGTTGACAAGGAAGGGCCAGTGCTTTCAAAGCTTGGTTCGAGTTCCACGGCTGAGCTTCACCCCAAAGCACAAGGTGAATCCAAACCTACTTCCATGCCACCCACAAGTGTTATGACAAGGCTCATTTTGATCATGGTTTGGAGGAAGCTGATTAGGAACCCCAACACATACTCCAGCCTCTTTGGTCTCACTTGGTCTTTGATCTCATTCAAGTGGAATGTTGTTATGCCAGCAATTGTTGCTAAATCGATATCAATTTTATCTGATGCTGGTCTTGGGATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAGCCAAAGATTATTGCATGTGGAAACTCGGTTGCTTCCTTTGCTATGGCAGTTCGTTTTCTTACTGGTCCTGCAGTCATGGCTGTTGCTTCAATCGTTGTAGGGCTCAGGGGAGTTCTATTGCACATTGCTATTGTACAGGCTGCTCTGCCTCAAGGGATTGTCCCTTTTGTGTTTGCTAAGGAATACAACGTTCATCCTGACATACTAAGCACCGGGGTTATATTTGGGATGCTAATTGCTCTTCCTATTACGCTAGTTTACTACATTTTGCTTGGGCTTTGA 1785 0.5042 MITLLDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADTLQKAIVLAVLLVWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDDSGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDIISLDGKEPLQTEAEVGDDGKLHVTVRKSASSRSEIFSRRSHGGLNSVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSIVNGGGGRNNNVSVSPRQSNFGAFDEESGGGMRVNGGYPGPANAGIFSPVAKKKGGESGGGGGGGGGKDLHMFVWSSSASPVSEGGIHAFRGGGDYGSDQLPVCGVAHQKDYDEFGHDEFSFGNRTIANGVDKEGPVLSKLGSSSTAELHPKAQGESKPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVVMPAIVAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1077 594 Pfam Membrane transport protein 9 589 IPR004776 GO:0016021|GO:0055085
Gso19g1077 594 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 594 - -
Gso19g1077 594 TIGRFAM 2a69: auxin efflux carrier 1 594 IPR014024 -
Gso19g1077 594 MobiDBLite consensus disorder prediction 407 428 - -
Gso19g1077 594 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1077 Gso-Chr19 38715188 38718658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1077 1 585 Organic Solute Cotransporters AT1G73590 65.156 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1077 K13947 - gmx:100820506 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1077 19 38715188 38718658 Gso3g1080 3 35896779 35900194 GST