Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1042 ATGACTGCTCAGACCCAAGAGGAGCTTCTTGCGGCCGACCTTGAGCAACAAAAGATCCATGATGATGAGCCTGTAGTTGAGGATGATGATGAGGATGACGAAGATGACGACGATGAGGATGACGACAATGTTGAAGGTGATGCATCTGGTAGGTCCAAGCAGACCAGAAGCGAAAAGAAGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAACCTGTCACAGGTGTCAGTCGTGTGACTGTTAAGAAGAGCAAAAATATCCTGTTTGTTATATCAAAACCAGATGTTTTCAAGAGCCCGACTTCTGACACATACATTATATTCGGCGAAGCCAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCAGAGCAATTCAAGGCTCCTAATGTGAGCAATGATGGATCGAAGCCTGAAACCTCTGCTGCTGCTGCTCAAGACGACGAGGATGTCGACGAGACTGGTGTAGATCCCAAGGATATAGAGCTGGTGATGACTCAAGCTGGTGTGTTGAGATCAAGAGCTGTTAAGGCTCTCAAAGCTGCCAATGGCGACATTGTTGCTGCCATTATGGAGCTAACTAATTGA 594 0.4663 MTAQTQEELLAADLEQQKIHDDEPVVEDDDEDDEDDDDEDDDNVEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNVSNDGSKPETSAAAAQDDEDVDETGVDPKDIELVMTQAGVLRSRAVKALKAANGDIVAAIMELTN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1042 197 Pfam NAC domain 58 113 IPR002715 -
Gso3g1042 197 MobiDBLite consensus disorder prediction 24 45 - -
Gso3g1042 197 SMART NAC_2 58 114 IPR002715 -
Gso3g1042 197 Gene3D - 64 117 IPR038187 -
Gso3g1042 197 ProSiteProfiles NAC A/B domain profile. 55 120 IPR002715 -
Gso3g1042 197 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 3 197 IPR016641 GO:0005854
Gso3g1042 197 MobiDBLite consensus disorder prediction 129 159 - -
Gso3g1042 197 CDD UBA_NAC_euk 160 196 - -
Gso3g1042 197 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 197 - -
Gso3g1042 197 MobiDBLite consensus disorder prediction 1 68 - -
Gso3g1042 197 Gene3D - 158 195 - -
Gso3g1042 197 Pfam HYPK UBA domain 157 196 IPR044034 -
Gso3g1042 197 MobiDBLite consensus disorder prediction 46 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1042 Gso-Chr3 35188168 35190459 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1042 K03626 - gmx:100527254 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1042 3 35188168 35190459 Gso3g1042 3 35188168 35190459 ECH
Gso19g1055 19 38283656 38286496 Gso3g1042 3 35188168 35190459 GST