Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1055 ATGACTGCGCAGACCCAAGAGGAGCTTCTTGCGCAACACCTCGAACAGCAAAAGATCCATGATGATGAACCTGTCGTCGAGGATGATGATGACGAGGAAGTGGATGATGATGATGACGATGAGGATGATGACCATGACGAAGGACTAGAAGGTGATGCATCTGGTAGGTCGAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTTAAACTTGGAATGAAACCTGTCACAGGTGTCAGTCGAGTGACAGTCAAGAAGAGCAAGAATATCCTGTTCGTAATCTCAAAACCAGACGTTTTCAAGAGTCCAACATCTGACACGTACATTATATTTGGGGAAGCCAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCGGCAGAGCAATTCAAGGCTCCTAATTTGAGCAATGATGGATTGAAGCCCGAATCTTCTGCTGTTGCTCAAGATGATGAGGAAGTGGATGAGGCTGGTGTAGATCCCAAGGACATAGAGTTGGTGATGACTCAAGCTGGTGTTTCAAGACCTAAAGCCGTTAAAGCTCTGAAGGCAGCCGGTGGTGACATTGTTGCGGCCATTATGGAGCTAACTAATTAA 606 0.4637 MTAQTQEELLAQHLEQQKIHDDEPVVEDDDDEEVDDDDDDEDDDHDEGLEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNDGLKPESSAVAQDDEEVDEAGVDPKDIELVMTQAGVSRPKAVKALKAAGGDIVAAIMELTN* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1055 201 Gene3D - 162 199 - -
Gso19g1055 201 CDD UBA_NACA_NACP1 155 200 - -
Gso19g1055 201 ProSiteProfiles NAC A/B domain profile. 60 125 IPR002715 -
Gso19g1055 201 Pfam HYPK UBA domain 162 200 IPR044034 -
Gso19g1055 201 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 201 - -
Gso19g1055 201 MobiDBLite consensus disorder prediction 137 164 - -
Gso19g1055 201 MobiDBLite consensus disorder prediction 24 48 - -
Gso19g1055 201 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 3 201 IPR016641 GO:0005854
Gso19g1055 201 SMART NAC_2 63 119 IPR002715 -
Gso19g1055 201 Pfam NAC domain 63 118 IPR002715 -
Gso19g1055 201 MobiDBLite consensus disorder prediction 49 70 - -
Gso19g1055 201 Gene3D - 69 122 IPR038187 -
Gso19g1055 201 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1055 Gso-Chr19 38283656 38286496 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1055 K03626 - gmx:100791967 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1055 19 38283656 38286496 Gso3g1042 3 35188168 35190459 GST