Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1035 ATGATTTTCTCAAAGTCTTGTAGTTTTCTTGGGCTCTACCTCGTTATAGTGGCTTGTCTTGTTTTACAGTGCTGTGCCTATGCAAACCAGACTTCAACAACTCTGGTTGTAGATGCTTCTAAATCTGGAAGGCAAATTCCTGACACACTTTTCGGAATATTCTTTGAGGAGATCAACCATGCCGGTGCTGGTGGATTGTGGGCAGAGCTTGTTAACAACAGAGGTTTTGAAGCTGGGGGCACACAAGTTCCATCAAATATTGCACCTTGGACTATAGTAGGACAAGAATCAGCTATTTTACTACAAACTGAGCTTAGTTCTTGCTTCGAACGCAACAAGGTAGCATTAAGAATGGATGTGCTGTGTGACAATTGCCCTTCTGATGGTGTTGGTGTCTCTAACCCGGGTTTTTGGGGCATGAACATTGTGCAAGGGAATAAATACAAAATTGTCTTCTTTGTTAGATCAGAAGGACCACTTTATATGACGGTATCATTCAGAAAAACTGAAGGTGGAGGGATATTGGCTTCAAGCAATATCGATGCTTCTGAATCAGAAGTTTCAAAATGGAAAAGGATAGAGACTACATTGGTAGCTGATACATCAAGTTCCAATTCATCTTTGTATTTAACAACAACCAAAAAAGGGGTGATATTGCTGGACCAAGTGTCTGCTATGCCTTTGGACACATATAAGGGACATGGTTTTCGAGGTGACTTAGTTAACATGTTATTAGAGTTGAAACCAACCTTTTTCAGATTTCCAGGTGGCTGTTTTGTTGAAGGACAAACATTAAGAAATGCATTTCGGTGGAAAGATAGTGTTGGACCCTGGGAAGAGAGACCTGGTCACTTTGGTGATGTTTGGAGTTATTGGACAGATGAAGGATTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAGGCCATTGTGGGTATTTAACAACGGCATCAGCCATACTGATCAAGTAGATACAAGCGTCATCACACCTTTTGTGAAAGAAGCCCTTGATGGTATTGAGTTTGCCAGAGGTGAGGCTACTTCAAAATGGGGTTCCCTTAGAGCATCTATGGGGCACCCAAAGCCTTTTGACCTAAAATATGTTGCTATTGGAAATGAAGATTGTGGGAAGACAAACTACCAAGGAAACTACCTAGCTTTCTACGAGGCAATACGACATGCTTATCCGGATATTCAAATGATTTCAAATTGTGATGCTTCGTCTAAACCGTTAGATCACCCAGCTGATATGTATGATTATCACACTTATCCTCATGAAGCTATAAAAATGTTTAATAACGCTCATGTGTTTGATAAGACACCACGAAACGGTCCAAAGGCTTTTGTGAGTGAATATGCTCTAATTGGAGACATACAAGCTAAGCATGGAACCCTTTTGGGAGCTGTGTCCGAAGCTGGATTCCTTATTGGATTAGAAAGAAACAGTGATCATGTGATAATGGCTAGCTATGCGCCACTTTTTGTAAATGCAAATGACAGGATGTGGAGCCCAGCTGCAATTGTTTTTAATTCCAATCAGGTTTATGGAACTCCCAGCTATTGGGTGCAGTTTATGTTTAGAGAGTCAAATGGAGCAACATTTTTAAAATCACAACTTCAAACGCCTGACCCTGATTCAGTTGCTGCATCTGCAATTCTTTGGAAAAATCTCCAAGATAAAAAAACTTACTTAAAAATAAAGGTTGCAAACGTGGGGAGCAACCAAATAAATTTCAAGATTTCTCTAAACGGATTTGAGAGCTCAAATGCAACTAAGGCAACAAAGACAGTGCTCACATCTAAGAATGCATTAGATGAGAATAGCCTCGCAAACCCAACAAATATAGTACCAAAGCGAAGTCCACTTCAGAGTGCTAACAACGAGATAAATGACATACTTCCTCCAGTTTCATTGACGGTATTTGATTTATTAAAAAATGAATGA 1956 0.4003 MIFSKSCSFLGLYLVIVACLVLQCCAYANQTSTTLVVDASKSGRQIPDTLFGIFFEEINHAGAGGLWAELVNNRGFEAGGTQVPSNIAPWTIVGQESAILLQTELSSCFERNKVALRMDVLCDNCPSDGVGVSNPGFWGMNIVQGNKYKIVFFVRSEGPLYMTVSFRKTEGGGILASSNIDASESEVSKWKRIETTLVADTSSSNSSLYLTTTKKGVILLDQVSAMPLDTYKGHGFRGDLVNMLLELKPTFFRFPGGCFVEGQTLRNAFRWKDSVGPWEERPGHFGDVWSYWTDEGFGYFEGLQLAEDIGARPLWVFNNGISHTDQVDTSVITPFVKEALDGIEFARGEATSKWGSLRASMGHPKPFDLKYVAIGNEDCGKTNYQGNYLAFYEAIRHAYPDIQMISNCDASSKPLDHPADMYDYHTYPHEAIKMFNNAHVFDKTPRNGPKAFVSEYALIGDIQAKHGTLLGAVSEAGFLIGLERNSDHVIMASYAPLFVNANDRMWSPAAIVFNSNQVYGTPSYWVQFMFRESNGATFLKSQLQTPDPDSVAASAILWKNLQDKKTYLKIKVANVGSNQINFKISLNGFESSNATKATKTVLTSKNALDENSLANPTNIVPKRSPLQSANNEINDILPPVSLTVFDLLKNE* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1035 651 Gene3D - 531 648 IPR013780 -
Gso3g1035 651 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gso3g1035 651 Gene3D - 67 220 - -
Gso3g1035 651 SUPERFAMILY Glycosyl hydrolase domain 521 646 - -
Gso3g1035 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 649 - -
Gso3g1035 651 Gene3D Glycosidases 221 530 - -
Gso3g1035 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 649 - -
Gso3g1035 651 SUPERFAMILY (Trans)glycosidases 205 538 IPR017853 -
Gso3g1035 651 SMART alpha_l_af_c 454 641 IPR010720 GO:0046373|GO:0046556
Gso3g1035 651 Pfam Alpha-L-arabinofuranosidase C-terminal domain 455 641 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1035 Gso-Chr3 35092442 35098779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1035 12 649 Glycoside Hydrolase AT3G10740 60.494 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1035 K01209 - gmx:100780771 1324.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1047 19 38188264 38194612 Gso3g1035 3 35092442 35098779 GST