Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1047 ATGGCGTATTGTTCTCTCAAGGTTTTGTTTGGTGTTGTGCTCTATGCCTTTGCGTTCCAACATTGCTACGCTGATGCAAACTCAACACTGATTGTAAATGCTGCTTCCAATAATGCAACTGCAAGGCAAATTCCTAACACTTTTCTTGGAGTATTCGTTGAGGAGATTAATCATGCTGGCGCAGGGGGACTGTGGGCTGAACTTGTTATCAATAGAGGCTTTGAAGCTGGAGGCCCAAACAATGCCTTAAATGTTTATAATTGGTCTATTATTGGAGATGAATCATCCATTTCGGTATCAATTAGCCGTACCTCTTGCTTTGAGCGCAATAAAGCTGCATTGCAAATGGAGGTGTATTGTGGTGCTCACAAACCTTGCCCATATGGTGTTGGTATCTCTAACCCTGGTTATTGGGGCATGAATATTGAGCAAGGGAAGAGGTATAAGGTGGTCTATCATGTTAAATCAGAAAGAAAGTTTGATTTTCAACTGTCATTCACGGGTGTTGATGTTATAAAAGTGGCATCTAGTAGAAGACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCAAAAACTACTAATCACTATTCAAGTCTTCAAATAACCACAACAAGAGAAGGGAGTTACTTGTTAGACCAAGTGTCAGTTATGCCATTGGACACTTACATGGGTCATGGCTTCCGAAATGACCTTTTTCAAATGGTGGCAGATTTGAAACCAAAATTTCTCAGATTTCCAGGTGGTTGTTATGTTGAAGGAAATTATCTGAGAAACCGATTTCAATGGAAAGATACTATTGGACCATGGGAGGAGAGACCTGGGCACCTTGGTGATGTTTGGAACTATTGGAGTGATGATGGAATTGGTTTTTTTGAGTATCTCCTGCTAGCAGAGGACCTTGGGGCATTGCCGATATGGGTGTTTAACGCTGGTTTCGGCCTTAATGATGAAATTGATACATCATCCATAGAATCCTATGTGCAAGACGCCCTCGATGGCATTGAATTTGCAAGAGGCTCTCCTACATCACAATGGGGTTCTGTTAGAGCTGCAATGGGACATCCTACCCCATTTGACTTGAGATATGTTGCTGTTGGAAATGAAAATTGTTGGCAAACTTATTTTAATTATCAAGGAAACTACCTTAAGTTCTATGAGGCTATAAAAGCTGCCTACCCAGATATTCAAATTATCTCAAATTGTGATGCTTCCAGAAAACCATTAAATCACCCGGCTGATTTGTTCGATTTTCATACATATCCAAGCTCCAATGACATGTTTTCTCTGTTTACTAAGTTCGACAACACATCACGATCTGGTCCAAAGGCTTTTGTTAGTGAATACGCTGTGAAAAGTGATGCTGCAAACGGAAATCTCTTGGCTGCTGTGGCTGAAGCCGCATTTCTTATTGGACTAGAAAAGAACAGTGATATTGTGGAGATGGTTTCTTATGCACCACTTTTCTTAAATATAAATGACAAGAGATGGATTCCCGATGCAATTGTGTTCGACTCTTATCAGGTTTATGGAACTCCTAGCTATTGGGTGCAGAAACTTTTTATTGAATCCAGTGGAGCAACATTTATTGACTCGACACTCAGTACAACTTCATCTAATAAACTTGCTGCATCTGTAATTATTTGGCAAGATTCTTCAGATAAGAAAAATTACCTAAGAATAAAGGCAGTAAACTTTGGAGCAGCCGCTGAGAGTCTTGACATTGATTTAAGTGGGTTGGACTCAAATGTGCAACAATATGGTTCTACAATAACAGTGCTTACATCAACCAACGTAATGGATGAAAATTCATTCTTGGAGCCGAAGAAGGTGGTGCCACAAACAAGTCCATTGGAGATTGATGACAAACACCTGATTGTTCTTCTCCCTTCCTATTCAGTGATATCATTGGATTTTTTAATATGA 1941 0.3988 MAYCSLKVLFGVVLYAFAFQHCYADANSTLIVNAASNNATARQIPNTFLGVFVEEINHAGAGGLWAELVINRGFEAGGPNNALNVYNWSIIGDESSISVSISRTSCFERNKAALQMEVYCGAHKPCPYGVGISNPGYWGMNIEQGKRYKVVYHVKSERKFDFQLSFTGVDVIKVASSRRHVYGDGKWKRVETIVEAKTTNHYSSLQITTTREGSYLLDQVSVMPLDTYMGHGFRNDLFQMVADLKPKFLRFPGGCYVEGNYLRNRFQWKDTIGPWEERPGHLGDVWNYWSDDGIGFFEYLLLAEDLGALPIWVFNAGFGLNDEIDTSSIESYVQDALDGIEFARGSPTSQWGSVRAAMGHPTPFDLRYVAVGNENCWQTYFNYQGNYLKFYEAIKAAYPDIQIISNCDASRKPLNHPADLFDFHTYPSSNDMFSLFTKFDNTSRSGPKAFVSEYAVKSDAANGNLLAAVAEAAFLIGLEKNSDIVEMVSYAPLFLNINDKRWIPDAIVFDSYQVYGTPSYWVQKLFIESSGATFIDSTLSTTSSNKLAASVIIWQDSSDKKNYLRIKAVNFGAAAESLDIDLSGLDSNVQQYGSTITVLTSTNVMDENSFLEPKKVVPQTSPLEIDDKHLIVLLPSYSVISLDFLI* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1047 646 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 4 646 - -
Gso19g1047 646 Gene3D - 528 644 IPR013780 -
Gso19g1047 646 SMART alpha_l_af_c 452 638 IPR010720 GO:0046373|GO:0046556
Gso19g1047 646 Pfam Alpha-L-arabinofuranosidase C-terminal domain 453 638 IPR010720 GO:0046373|GO:0046556
Gso19g1047 646 Gene3D Glycosidases 220 527 - -
Gso19g1047 646 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 4 646 - -
Gso19g1047 646 SUPERFAMILY Glycosyl hydrolase domain 557 642 - -
Gso19g1047 646 SUPERFAMILY (Trans)glycosidases 205 534 IPR017853 -
Gso19g1047 646 Gene3D - 74 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1047 Gso-Chr19 38188264 38194612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1047 1 645 Glycoside Hydrolase AT3G10740 57.251 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1047 K01209 - gmx:100787734 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1047 19 38188264 38194612 Gso3g1035 3 35092442 35098779 GST