Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0826 ATGGAAGACTCAGATTCAGTTGCTACGCTGATAGATTCCACAACTTCTAAGATACAGCAGCTGCAAAAGGCATTTGCTGAACTTGAAAGTTACCGAGCTGTTACTCTGAACTTGAAATGGAAAGAACTCGAGGAACATTTTCATGGTCTGGAGAAATCCTTGAAGAGGCGCTTTCATGAATTGGAAGACCAGGAAAAAGAGTTTGAGAACAAAACAAGGAAGGCTCAGGAGATACTGGAGAAGCGGCAAGCAGCTGTTTATGCCAAGGAGCAAGCCACGTTGCAGAGGCTTCAGGAGAAAAGGGATGCTGCTGTATTTGACATTGTGAATGCTCGAGAAAAGCAGAGGAAGGTCACGATAAGTGATTTGGCTATTGTCTCCAATGGGGGTAAGGGGACATTTCATGTGGAGGACAAACCAGTGGATGCTGTGTCCTTTGCAGCTAATGGTAATGTGGAAGAGGTGGTACTTTCTCCTGAAAATGGAAATGTGGAGTTGTCTTATCCAGACTTGGTAAAACTTTGTAAAGAGATGGATGCTGCTGGGCTTCACAAATTCATATCTGACAACCGTAAGAACCTTGCTGCTGTAAGGGAGGAAATACCACATGCATTAAGAGCAGCTCCTAACGCCGCCTGTTTAGTTTTAGATTCTCTGAAGGGGTTTTACTGTACAGAAGTGTCAAATCAGGACGTAAAGAAGGATGCTAACTTACTGGGTGTTCGCCGAACATGTATCATGCTGATGGAATGTCTATGTGATTTCCTGAGCAACTCAGGTTGTGTTTCTAATGTAATTTCAGAAGATATCAAGGACCGGGCTAAGGCAGTTGCTGAAGAATGGAAACCCAGATTGGATGCTCTTGACATCGATGCTAGCAATGTGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCCAGTTTTGGTATTGCCTCTGGTTTTAATGAGGAGGAGTTATCTAGGCTAATTCCAATGGTATCTCGACGTCGCCAAACTGCTGATTTATGTCGTTGCCTTGGGTTGTCAGAGAAGATGCCTGGTGTCATTGAAGTTTTGGTGAATAGTGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACAGAACAATTTTCACCCATTCCTTTACTGAAGTCTTACTTGAAGGATGCTAGAAAAATTTCTTCTCCTGTCAGAAGTGTTAACTCATCTCCCACTGCACAGATTGATGTTAATGATCGAGAACTGATTGCACTTAAAGCTGTAATTAAGTGTATTGAAGATCACAAACTTGATGACCAGTACCCTCTGGATCCTCTCCAGAAGCGAGCGACCCAACTCGAGAAGGCCAAGGCTGACAAGAAAAGGGTAACTGAAGCAACAAAGCCTCAACCCAAGAGACCCCGTGCTAATGGTGTGGGATATGGCCCGCGTGTCACTAACATTCTATCTGACAAAACTTCTTATGCTAGAGTTGCTGACAGGTATCCTCAATACGTGTATGACCGACCTTACATGTACCCTGCACCAACTGACAATCACTGCCCTCCTCTCATGGGTTCTGCAACTTATAACATCTCTCCTAATCCTGGCAACTACTTTGGAAATGGCTATCAGTACCAAGCTACATATCTCCACTAG 1635 0.4385 MEDSDSVATLIDSTTSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTRKAQEILEKRQAAVYAKEQATLQRLQEKRDAAVFDIVNAREKQRKVTISDLAIVSNGGKGTFHVEDKPVDAVSFAANGNVEEVVLSPENGNVELSYPDLVKLCKEMDAAGLHKFISDNRKNLAAVREEIPHALRAAPNAACLVLDSLKGFYCTEVSNQDVKKDANLLGVRRTCIMLMECLCDFLSNSGCVSNVISEDIKDRAKAVAEEWKPRLDALDIDASNVNSLEAHAFLQLLASFGIASGFNEEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQFSPIPLLKSYLKDARKISSPVRSVNSSPTAQIDVNDRELIALKAVIKCIEDHKLDDQYPLDPLQKRATQLEKAKADKKRVTEATKPQPKRPRANGVGYGPRVTNILSDKTSYARVADRYPQYVYDRPYMYPAPTDNHCPPLMGSATYNISPNPGNYFGNGYQYQATYLH* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0826 544 Coils Coil 51 81 - -
Gso3g0826 544 MobiDBLite consensus disorder prediction 446 461 - -
Gso3g0826 544 Pfam Frigida-like protein 168 456 IPR012474 -
Gso3g0826 544 PANTHER FRIGIDA-LIKE PROTEIN 3 544 - -
Gso3g0826 544 Coils Coil 94 114 - -
Gso3g0826 544 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 544 - -
Gso3g0826 544 MobiDBLite consensus disorder prediction 446 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0826 Gso-Chr3 30183481 30189741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0826 - - gmx:100806993 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0638 16 8146900 8152586 Gso3g0826 3 30183481 30189741 GST