Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0638 ATGGAAGACTCGGATTCAGTTGCTACATTGATAGATTCTACTACTTCTAAGATACAACAGCTGCAGAAGGCATTTGCTGAACTTGAAAGTTATCGGGCTGTTACTCTTAACTTGAAATGGAAAGAACTAGAGGAACATTTCCATGGTCTTGAGAAATCCTTGAAGAGGCGCTTTGATGAATTGGAAGACCAAGAAAAAGAGTTTGAAAGCAAAACGAGGAAGGCTCATGAGATACTGGAGAAGCGGGAAGCAGCTGTTTTTGCCAAGGAGCAAGATTCATTCCAGAGGCTTCAGGAAAAAAGAGATGCTGCTTCATTTGCCATTGTAAATGCTCGAGACAAGCAGAGGAAGATTTCATCACGTGAATTGGCTACTGTCTCAAACGGTGGTAAAGGAGGGATTCCAGGAGTGGAGGAGAAACCTGTGGATACTGTGTCCACTGCAGCTGAAGGTAATGTGGAAGATATAAAAATTCCTGACAATGGAAATGTGGAGTTGGTATCTTATCCAGAGTTGGTAAAACTATGCAAAGAGATGGATGCTGCTGGACTTCACAAATTCATATCTGATAACCGTAAGAATCTTGCTACTGTAAGGGATGAAATACCAAATGCATTAAGAGCTGCTACTAATGCTGCCCATTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTACAGAAGTGTCAAATCAGGACCTAAAGAAGGATGGTAACTTATTGGGTCTTCGTCGAACCTGTATCATGCTGATGGAATGTTTATGTGATTTCCTGAGCAGCTCAGGTTGTGTTTCTAATGTGATTTCTGAGGATATCAAGGACAGGGCAAAAGCAGTTGCTGAAGAATGGAAACCCAGATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTACAACTTGTAGCTAGTTTTGGCATTGCCTCTGGTTTTGATGAGGAGGAGTTATCCAGATTGATTCCAATGGTGTCTCGGCGCCGCCAAACTGCTGATTTATGTCGTTTTCTTGGGCTGTCAGAAAAGATGCCTGGTGTTATTGGGGTTTTGGTGAACAGTGGGCGACAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACTGAACAATTTTGTCCTGTTTCTTTACTGAAGTCTTACTTGAAAGATGCAAGAAAAGCTTCTTCTCCTGTTAGAAGTGTTAATTCTTCTCCCACTGCACAGATTGAGGTGAATGAACGAGAGCTGGTCGCACTTAAGGCTGTAATCAAGTGCATTGAAGAACATAAACTTGATGAGCAGTATCCTCTGGATCCTCTCCAGAAACGTTTGGTGCAGCTAGAGAAGGCCAAAGCTGACAAGAAGAGGGAAACTGAAGCCACAAAACCTCAACCCAAGAGACCCCGTGCAAATGGCGCCGGATATGGTCCACGTGTCACTAACATTCTTTCCGACAAAGCTTCCTATGCTAGAGTTGCTGACAGGTATCCACAGTTTGTGTATGACCGACCACCTTATATGTACCCTGCTCCAACTGATAATCATTGCCCCCCTCTCATGACCACTGCAACGTATAACTTCTCTCCCAGCCATGGCAACTACTTTGGAAATGGGTATCAGTACCAAGCTACATATCTCCACTAG 1641 0.4308 MEDSDSVATLIDSTTSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFDELEDQEKEFESKTRKAHEILEKREAAVFAKEQDSFQRLQEKRDAASFAIVNARDKQRKISSRELATVSNGGKGGIPGVEEKPVDTVSTAAEGNVEDIKIPDNGNVELVSYPELVKLCKEMDAAGLHKFISDNRKNLATVRDEIPNALRAATNAAHLVLDSLEGFYCTEVSNQDLKKDGNLLGLRRTCIMLMECLCDFLSSSGCVSNVISEDIKDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLVASFGIASGFDEEELSRLIPMVSRRRQTADLCRFLGLSEKMPGVIGVLVNSGRQIDAVNLAFAFDLTEQFCPVSLLKSYLKDARKASSPVRSVNSSPTAQIEVNERELVALKAVIKCIEEHKLDEQYPLDPLQKRLVQLEKAKADKKRETEATKPQPKRPRANGAGYGPRVTNILSDKASYARVADRYPQFVYDRPPYMYPAPTDNHCPPLMTTATYNFSPSHGNYFGNGYQYQATYLH* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0638 546 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 546 - -
Gso16g0638 546 Coils Coil 51 81 - -
Gso16g0638 546 MobiDBLite consensus disorder prediction 449 463 - -
Gso16g0638 546 PANTHER FRIGIDA-LIKE PROTEIN 3 546 - -
Gso16g0638 546 Coils Coil 436 456 - -
Gso16g0638 546 Pfam Frigida-like protein 168 457 IPR012474 -
Gso16g0638 546 MobiDBLite consensus disorder prediction 449 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0638 Gso-Chr16 8146900 8152586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0638 - - gmx:100786746 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0638 16 8146900 8152586 Gso3g0826 3 30183481 30189741 GST