Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0816 ATGAAGGGTGGTGGTGGGAAGAGAAAGGCTGCTACCTCGGAGGCTCCGAACGATGTTGCTGCTGCTGCTGGTGGTGCTTCTGTTCCTTCTGATGGTGCTGATTTGGGTGTTGGAGACGGTGTTGGTGTGAAAGTTCAAAACTTTGAGGGAAACGAGGGTACCCAGTTGCGGAAAACTGAAGAAGAAAAAGAAGAGCCCAACGTGGAGGGTGATGATGAAGGAGAAGAAGAAGAAGATTATGCTGAGGGAGAGGAAGAATATGAAGAAGGAGAAAATGGTGGTGCTGCTGTTGCTCAAGGGGGACGACAAGGTTTTCCTGTTCTTGGTGAGAATTTCTTTGAGGTTCAGGCTATTCGTCGTAAGAGGGTGCGCAAGGGTCAGGTGCAATACTTAATCAAATGGAATGGGTGGCCTGAGACAGCCAACACATGGGAGCCTCCAGAAAATCTAGAGTCTGTTCCTGATGTTGTTGAAGCTTTTGAGGAGAGCTTGAAGTCAGGCAAACATCGGAAGCGCAAACGCAAGCATGTAGTGCATCATACTCAACCCAAGAAGCGGCTGGAGCGTTCTACCACTCCTTACAGCCTTCGGCGTTTTTCGACTGGTACAGCTGAGAACCATACACAGTCAGCTCCTCCTCTTATTGATCCTAGCCTTCCTAATATTCCCGCCTTCCCTCGTACTGTGCTGTTTTCTGATGATGTGGGAAATGGTGCTGAAGGCAGCAGTCTTAGAAAAGCCACACCCTCTAATGCTAACAGGTCTGCAAATGGTTCAGAACCAAATATTAAAAGGACTGAGGAAAATGATTATGATCCTGTGCTTAGTGAGCTTAAAACTATGACTGCCAATGGGAATGATACAGACAGGCTTGCAATACGGATTCCAGAAGCCAAGGGTTCTGGGCCTTCTGGCAGTAACGATCAAATGGATGCTAAATCAAAGGGGGTTTCCATGGAAACAAATGCAAGTGGCCGCTGCCGGGGATCCAAAAGGAGAAAATGTGGTTCCGTAAAGAGGTTCAAGAAAGAATTATATGCTAATGAGCCTGCTAATACAGAAAATCCAGTTGGCTTGCCTGTTAGTACAGCTGAGCCAGAACAAACAAGAGATGCTGGTAGTGGTGGTAATACTAATCATGCCAGACCTGCTAGCAATATTGTAAACATTATAAAGCCAGTAGGCTATTCAGCTTCAGTAGCCAGTGGAACGCAGGATGTTTTAGTAACCTTCGTGGCTTCAAAGTCTGATGGAACAGAAGTGATGGTTGACAACAAGTATCTAAAAACATTTAATCCACTTCTTCTGATCAATTTCTATGAGCAGCATCTTCGCTACAGCCCTACATTGTGA 1353 0.4605 MKGGGGKRKAATSEAPNDVAAAAGGASVPSDGADLGVGDGVGVKVQNFEGNEGTQLRKTEEEKEEPNVEGDDEGEEEEDYAEGEEEYEEGENGGAAVAQGGRQGFPVLGENFFEVQAIRRKRVRKGQVQYLIKWNGWPETANTWEPPENLESVPDVVEAFEESLKSGKHRKRKRKHVVHHTQPKKRLERSTTPYSLRRFSTGTAENHTQSAPPLIDPSLPNIPAFPRTVLFSDDVGNGAEGSSLRKATPSNANRSANGSEPNIKRTEENDYDPVLSELKTMTANGNDTDRLAIRIPEAKGSGPSGSNDQMDAKSKGVSMETNASGRCRGSKRRKCGSVKRFKKELYANEPANTENPVGLPVSTAEPEQTRDAGSGGNTNHARPASNIVNIIKPVGYSASVASGTQDVLVTFVASKSDGTEVMVDNKYLKTFNPLLLINFYEQHLRYSPTL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0816 450 MobiDBLite consensus disorder prediction 164 192 - -
Gso3g0816 450 MobiDBLite consensus disorder prediction 296 331 - -
Gso3g0816 450 MobiDBLite consensus disorder prediction 243 260 - -
Gso3g0816 450 Gene3D - 109 179 - -
Gso3g0816 450 MobiDBLite consensus disorder prediction 367 381 - -
Gso3g0816 450 SUPERFAMILY Chromo domain-like 103 170 IPR016197 -
Gso3g0816 450 MobiDBLite consensus disorder prediction 1 101 - -
Gso3g0816 450 SMART ChS_2 376 449 IPR008251 GO:0005634
Gso3g0816 450 CDD CD_CSD 113 162 - -
Gso3g0816 450 MobiDBLite consensus disorder prediction 167 183 - -
Gso3g0816 450 SMART chromo_7 112 165 IPR000953 -
Gso3g0816 450 MobiDBLite consensus disorder prediction 350 381 - -
Gso3g0816 450 Pfam Chromo (CHRromatin Organisation MOdifier) domain 113 162 IPR023780 -
Gso3g0816 450 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 1 449 IPR044251 GO:0006325|GO:0031507
Gso3g0816 450 MobiDBLite consensus disorder prediction 236 270 - -
Gso3g0816 450 MobiDBLite consensus disorder prediction 302 325 - -
Gso3g0816 450 ProSiteProfiles Chromo and chromo shadow domain profile. 113 172 IPR000953 -
Gso3g0816 450 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 1 449 - -
Gso3g0816 450 ProSitePatterns Chromo domain signature. 130 150 IPR023779 -
Gso3g0816 450 MobiDBLite consensus disorder prediction 65 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0816 Gso-Chr3 29633879 29642247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0816 - - gmx:100812329 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0645 16 8527986 8536546 Gso3g0816 3 29633879 29642247 GST