Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0785 ATGGCAGCAGCAAAAACAACAACAACATCAGCACAACAGACCTCCTCGGCCCCACTCCGCCTTGACGCGCCACGCATTCCACCGCTCGCATACTCGGGCCGGGTCCAGCTCAAGGCGCTGCTGGACCGGCCCGAGTCAGTGGTGGGACGACACGTGATCGTTGGTGGATGGGTGAAGTCTGCTAAGGAGGTCAAGAAGAAGGCGGCGGCGCCTCCATCATTTGCGACGGCGACGGAAGAAACCACCGACGCCGGGGAAGGAGGGAAGGGCAAGGACGTGTCGTGCGTGGAGATTCTGCAGTCGAGGATACCGCTGCTTCGGAGCTTATTGGATGTGTTCGGAGGAGGCGGTTACGTGCAGCGCAAGAAACGTGAGAATGTAATTGTGCCGAATCATAAGGTTTTGCCTCCCAAAGCTTCTACGGCGTATCTGCTTCTAACGGATGGGTCGTGCGTTCCAAGCCTTCAGGTTGTTGTTGATTCTTCAGTAGCCACCCCTAGCAGACTTTTGCCTACTGGAACGTGTCTATTAGTGGAAGGTCAACTAGAAAGAGCAGAAGGGAAGCATGCTATTGAGCTTAAAGCTGAAAAAGTTCTTCACATTGGGACAGTAGATTTTGATAAGTACCCTTTATCAAAGAAGCGAATTCCACTAGATACCTTAAGAGATTACTCCCAATTTCGACCTCGAACAACCACGGTGGCAACTGTGGTGCGGATCCGTAGTTCTCTTTCTTTTGCAACCCACACATTTTTCAATGAGCATGCATTTATTGATGTGCAAGTACCTATTATAACTAGCACAGACTCTGAAGGGTTTAGCAACATGTTGAAGGTTAACACCCTGGAACAGAAAGCAGAGAAGGAGAAACTAGACACAATTTATGAGACTGAAGGTGTTAGCCTTGAACATGTGAAGGCAGCTGCAAAGGAGAAAAGCAACATTATTGAGCATTTGAAAAGAACTGAGAGCAATAGGGAAGCACTGGCTGCTGCAGTTCAGGATCTGAGGAAAACGAATGAACTCGCATCGCAAATGGAAGCAAGAGAAAAGAGAAAGTTAGGAGCTTCTTTTAAGGACGATGACAAAGTAGACTCTTCCAAAGAGTTTTTCCCTTTCCAAACTTATTTGACTGTCTCTGGACGCTTGCATCTCGAGAGTTATGCATGTGCTCTTGGAAATGTCTACTCATTTGGTCCTAGATTTCTAGCAGATAAAACGGATTCTGCTAAACATGCTGCAGAAATGTGGATGGTTGAGGTTGAAATGGCCTTTTCGCTATTAAAGGATTCCATGAATTGTGCAAATGACTTTTTCAAGTACCTCTGCAACTGGGTTCTGATACATTGCTCTGAAGAAATGAAGTTCGTTGCCAAAAGAATCGACAACACCTGCGTGAACCGTCTTCAGCAGATTATATTAGGTTCACCTGTAATGATGACCTACCATGAAGCTATAGATGTTCTTAGAAAGTTGTCCTACCAGGCTGAAGATAAGAAATTTGAAACAAATTTTGAGTCAGGGTTTGCACTCACTTCAGAGCACCTAAGCTATCTAACTGATACCATCTACCAGAAGCCGGTTGTGATATACAATTATCCAAAAGAAGCTAAGCCATTTTATGCTCGCCAGAATGATGATGGAACTGTAGCTGCGTTTGACTTGGTTGTCCCAAAGCTTGGAACAATAATATCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGGATTGATGAGTTAGGCTTGCCGCGAGAGAAGTATGAATGGTACCTAGATCTTCGTCGAAACGGAACAGTGAAGAACTCTGGGTTCACTCTAAGGTTTGACCTGATGGTCCTCTTCGCAACTGGCCTTGGCAATGTTAGGGACGTTATCCCTTTCCCAAGAAGCTATGGCAAAGCCAATAACTAA 1920 0.4594 MAAAKTTTTSAQQTSSAPLRLDAPRIPPLAYSGRVQLKALLDRPESVVGRHVIVGGWVKSAKEVKKKAAAPPSFATATEETTDAGEGGKGKDVSCVEILQSRIPLLRSLLDVFGGGGYVQRKKRENVIVPNHKVLPPKASTAYLLLTDGSCVPSLQVVVDSSVATPSRLLPTGTCLLVEGQLERAEGKHAIELKAEKVLHIGTVDFDKYPLSKKRIPLDTLRDYSQFRPRTTTVATVVRIRSSLSFATHTFFNEHAFIDVQVPIITSTDSEGFSNMLKVNTLEQKAEKEKLDTIYETEGVSLEHVKAAAKEKSNIIEHLKRTESNREALAAAVQDLRKTNELASQMEAREKRKLGASFKDDDKVDSSKEFFPFQTYLTVSGRLHLESYACALGNVYSFGPRFLADKTDSAKHAAEMWMVEVEMAFSLLKDSMNCANDFFKYLCNWVLIHCSEEMKFVAKRIDNTCVNRLQQIILGSPVMMTYHEAIDVLRKLSYQAEDKKFETNFESGFALTSEHLSYLTDTIYQKPVVIYNYPKEAKPFYARQNDDGTVAAFDLVVPKLGTIISGSQNEERLNMISSRIDELGLPREKYEWYLDLRRNGTVKNSGFTLRFDLMVLFATGLGNVRDVIPFPRSYGKANN* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0785 639 Gene3D Bira Bifunctional Protein; Domain 2 210 638 IPR045864 -
Gso3g0785 639 MobiDBLite consensus disorder prediction 1 19 - -
Gso3g0785 639 Pfam tRNA synthetases class II (D, K and N) 219 284 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Gso3g0785 639 Pfam tRNA synthetases class II (D, K and N) 367 632 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Gso3g0785 639 MobiDBLite consensus disorder prediction 69 89 - -
Gso3g0785 639 PANTHER ASPARAGINE--TRNA LIGASE, CYTOPLASMIC 2-RELATED 31 639 - -
Gso3g0785 639 Coils Coil 319 349 - -
Gso3g0785 639 SUPERFAMILY Class II aaRS and biotin synthetases 218 633 IPR045864 -
Gso3g0785 639 CDD EcAsnRS_like_N 142 203 - -
Gso3g0785 639 MobiDBLite consensus disorder prediction 1 23 - -
Gso3g0785 639 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 31 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0785 Gso-Chr3 28364243 28370325 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0785 K01893 - gmx:100787363 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0674 16 9626343 9631842 Gso3g0785 3 28364243 28370325 GST