Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0674 ATGGCAGCAGCAGCAACAACAACAACAGCACAAGATACCTCCTCGGTCCCGCCGCTCGCGTACTCAGGCCGGGTCCAGCTCAAGGAGCTGCTGGACCGGTCCGAGGCGGCGGTGGGGCAGCGCGTGGTCGTGGGCGGGTGGGTGAAGTCTGCGAAGGAGGTTGAGAAGACGGCGCCGCCCCCATCGATTGCGACGACGGACGACACCGCCAGGGAAGGAGGGAAGGGCAAGGACGTGTCGTGCGTGGAGATTCTGCAGTCGAGGATACCGCTGATTCGGAGTATACTGGATGTGTTCGGAGGTGGCGGTTATGGGCAGCGCAAGAAACGTGAGAATGTGACTGCGCCGAATGATAAGGTTTTGCCTCCCAAAGCTTCTACGGCGTATTTGCTTCTAACGGATGGGTCGTGCGCTCCAAGCCTTCAGGTTGTTGTTGATTCTTCAGTAGCTACTCCTAGCCGGCTTGTGCCTACTGGAACGTGTCTATTAGTGGAAGGTCAACTAGAAAGAGCAGAGGGGAAGCATGCTATTGAGCTTATAGCTGAGAAAGTTCTTCATATTGGGACAGTAGATTTTGACAAGTACCCATTATCAAAGAAAAGAATTCCACTGGATACGTTGAGAGATTACTCTCAATTTCGGCCTCGAACAACCACGGTGGCAACTGTCATGCGGATTCGAAGTTCTCTTTCTTTTGCAACCCACACATTTTTCAATGAACATGCGTTTATTGATGTGCAAGTACCCATTATTACTAGCACAGACTCTGAAGGGTTTAGCAACATGTTCAGGGTTAACACCCTGGAGCAGAAAGCAGAGAAGGAGAAACTAGAAACCGTTTATGAGACAGAAGGTGTTAGCCTTGAACATGTGAAGGCAGCTGCAAAGGAGAAAAGCAACATTGTTGAGCATTTGGAAAGAACTGAGAGCAATAGGGAAGCACTGGCTGCTGCTGTTCAGGATCTGAGGAAAACAAATGAACTCGCATCACAATTGGAAGCAAGAGAAAAGAGAAAGCTAGGAGCTTCTTTTAAGGATGACAAAGTAGACTCTTCCAAAGAGTTTTTCCCTTTCCAAACTTATTTGACTGTCTCGGGTCGCTTGCATCTGGAGAGTTATGCATGTGCTCTTGGAAATGTCTACTCATTTGGTCCTAGATTTCTAGCAGATAAAACGAATTCTGCTAAACATGCTGCAGAAATGTGGATGATCGAGGTTGAAATGGCCTTTTCGCAATTGAAGGATTCCATGATTTGTGCTAATGACTTTTTCAAGTACCTCTGCAACTGGGTTCTGGTACATTGCTCTGAAGAAATGACGTTCGTTGCCAAAAGAATCGACAACACCTGCATGAATCGTCTTCGGCAGATTATATCAGGTTCTCCTGAAATGATGACCTACCATAAAGCTATAGATGTTCTTAGAAAGGCTGAAGATAAGAAATTTGAAACAAATTTTGAGTCAGGTTTTGTACTCACTTCAGAGCACCTAAGTTATCTAACTGATATGATCTACCAGAAACCGGTTATGATATACAATTATCCAAAAGAAGCTAAGCCATTTTATGCTCGCCAGAATGATGATGGTACTGTAGCTGCATTTGACTTGGTTGTCCCAAAGCTAGGAACAATAATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGGATTGATGAGTTAGGCTTGCCACGAGAGAAGTATGAATGGTACCTAGATCTTCGTCGAAATGGAACAGTGAACAACTCTGGGTTCACTCTAAGGTTTGACCTTATGGTTCTCTTTGCAACTGGCCTTGGCAATGTCAGGGACGTTATCCCTTTCCCAAGAAGCTATGGCAAGGCCTATACCTAA 1863 0.4611 MAAAATTTTAQDTSSVPPLAYSGRVQLKELLDRSEAAVGQRVVVGGWVKSAKEVEKTAPPPSIATTDDTAREGGKGKDVSCVEILQSRIPLIRSILDVFGGGGYGQRKKRENVTAPNDKVLPPKASTAYLLLTDGSCAPSLQVVVDSSVATPSRLVPTGTCLLVEGQLERAEGKHAIELIAEKVLHIGTVDFDKYPLSKKRIPLDTLRDYSQFRPRTTTVATVMRIRSSLSFATHTFFNEHAFIDVQVPIITSTDSEGFSNMFRVNTLEQKAEKEKLETVYETEGVSLEHVKAAAKEKSNIVEHLERTESNREALAAAVQDLRKTNELASQLEAREKRKLGASFKDDKVDSSKEFFPFQTYLTVSGRLHLESYACALGNVYSFGPRFLADKTNSAKHAAEMWMIEVEMAFSQLKDSMICANDFFKYLCNWVLVHCSEEMTFVAKRIDNTCMNRLRQIISGSPEMMTYHKAIDVLRKAEDKKFETNFESGFVLTSEHLSYLTDMIYQKPVMIYNYPKEAKPFYARQNDDGTVAAFDLVVPKLGTIISGSQNEERLNMISSRIDELGLPREKYEWYLDLRRNGTVNNSGFTLRFDLMVLFATGLGNVRDVIPFPRSYGKAYT* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0674 620 MobiDBLite consensus disorder prediction 54 75 - -
Gso16g0674 620 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 21 618 - -
Gso16g0674 620 Gene3D Bira Bifunctional Protein; Domain 2 196 619 IPR045864 -
Gso16g0674 620 Pfam tRNA synthetases class II (D, K and N) 205 270 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Gso16g0674 620 Pfam tRNA synthetases class II (D, K and N) 351 613 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Gso16g0674 620 PANTHER ASPARAGINE--TRNA LIGASE, CYTOPLASMIC 2-RELATED 21 618 - -
Gso16g0674 620 SUPERFAMILY Class II aaRS and biotin synthetases 183 617 IPR045864 -
Gso16g0674 620 Coils Coil 288 335 - -
Gso16g0674 620 TIGRFAM asnS: asparagine--tRNA ligase 125 618 IPR004522 GO:0000166|GO:0004816|GO:0005524|GO:0006421
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0674 Gso-Chr16 9626343 9631842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0674 K01893 - gmx:100800893 1217.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0674 16 9626343 9631842 Gso3g0785 3 28364243 28370325 GST