Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0740 ATGGCACAACGTTCTCATGTACCCAAATTTGGCAATTGGGATAGTGGAGAGAATGTTCCTTATACAGCATATTTTGACAAGGCGCGGAAAGGTCGAACTGGGGCAAGGATAATAAATCCAAATGACCCTGAGGAAAATGCTGATTTAAGTCTGGATAATCCATCATCTGATCACCTACCTCCTACCAGACCCAGAGCTAATTCAGAGGATCAATCCGGAAAAGGATCATTGCCTTTGGAAGATGATCCTAAGCATTTTGTCGACTCTCCAGCTCGTCATGACAATGTAAGCAGTAGGAGTGGCAGTAGAAGCCACGGAGTAGGTTCTGCTGAAAACCGTAGAAGACATTCGACACAAAGTACTGGTTCCGAGTACAGTATTGAACGTTCACCACTTCATCGCCAGGCTAGAGCCCCTGGCAGAGACAGTCCCCAGTGGGAACCAAAGAATTCATATGACAACAGCCAGGGAACACCTGGGAGATCTCGGTTAAGACCGGTTAATCGAGGAGATGAAACACCGGATAAAGGTGCAGCTGTTCCAAAGTTTGGTGACTGGGATGTGAATAACCCATCATCAGCAGATGGCTTTACTCACATTTTCAACAAAGTGAGGGAGGAGAGACAGGGTGTCCCAGGACAAGTGCCGGGAACGCCTAATGAGAGACCACAAGCTATTAGGGGCCAATCTAACGATGACAAAGTCCAGTGTTGCTGCTTCGCATGGGGGGGCAAAAAATGA 741 0.4737 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENADLSLDNPSSDHLPPTRPRANSEDQSGKGSLPLEDDPKHFVDSPARHDNVSSRSGSRSHGVGSAENRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSYDNSQGTPGRSRLRPVNRGDETPDKGAAVPKFGDWDVNNPSSADGFTHIFNKVREERQGVPGQVPGTPNERPQAIRGQSNDDKVQCCCFAWGGKK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0740 246 MobiDBLite consensus disorder prediction 93 128 - -
Gso3g0740 246 MobiDBLite consensus disorder prediction 206 230 - -
Gso3g0740 246 MobiDBLite consensus disorder prediction 46 74 - -
Gso3g0740 246 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 243 - -
Gso3g0740 246 MobiDBLite consensus disorder prediction 30 191 - -
Gso3g0740 246 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 174 209 IPR008700 -
Gso3g0740 246 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 32 IPR008700 -
Gso3g0740 246 MobiDBLite consensus disorder prediction 75 92 - -
Gso3g0740 246 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 243 IPR040387 -
Gso3g0740 246 MobiDBLite consensus disorder prediction 147 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0740 Gso-Chr3 25074908 25078814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0740 K13456 - gmx:100499218 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0731 16 13345628 13350625 Gso3g0740 3 25074908 25078814 GST
Gso16g0731 16 13345628 13350625 Gso3g0740 3 25074908 25078814 PCT
Gso3g0740 3 25074908 25078814 Gso16g0731 16 13345628 13350625 PCT