Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0731 ATGGCACAACGTTCTCATGTACCCAAATTTGGCAATTGGGATAGTGGAGAGAATGTTCCTTATACAGCATATTTTGACAAGGCACGGAAAGGTCGAACTGGCACAAGGATAATAAATCCAAATGACCCCGAGGAAAATGCTGATTTAAGTTTTGATAATCCATCATCTGATAACCTACCTCCTACCAGACCTAGAACTAATTCAGAGGATCAATCCGGAAAAGGATCACTGCATTTGGAAGATGATCCCAAGAATTTTATCGAATCTCCAGCTCGTCATGACAATGTAAGCAGTAGGAGTGGCAGTAGAAGCCATGGAGTAGGTTCTGCTGATAACCGTAGAAGACATTCAACGCAAAGTACTGGGTCTGAGTACAGCATTGAACGTTCACCGCTTCATCGCCAGGCTAGAGCCCCAGGCAGAGACAGTCCCCAGTGGGAACCAAAGAATTCATATGACAGCAGTCAGGGAACACCAGGAAGGTCTCGGTTAAGACCGGCTAATCGAGGAGATGAAACACCAGATAAAGGTGCAGCTGTTCCAAAGTTTGGTGACTGGGATGTGAATAACCCTGCATCAGCAGATGGCTTTACTCACATTTTCAACAAAGTGAGGGAGGAGAGACAAGGCGGGCCAGGACAAGTGCCAGGAACGCCTAATGAGAGACCACAACCTATTAATGGCCTATCTAATGATGACAAAGTCCAGTGTTGCTGCTTTGCGTGGGGTGGGAAAAAATGA 741 0.4602 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGTRIINPNDPEENADLSFDNPSSDNLPPTRPRTNSEDQSGKGSLHLEDDPKNFIESPARHDNVSSRSGSRSHGVGSADNRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSYDSSQGTPGRSRLRPANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPGQVPGTPNERPQPINGLSNDDKVQCCCFAWGGKK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0731 246 MobiDBLite consensus disorder prediction 26 191 - -
Gso16g0731 246 MobiDBLite consensus disorder prediction 74 89 - -
Gso16g0731 246 MobiDBLite consensus disorder prediction 203 230 - -
Gso16g0731 246 MobiDBLite consensus disorder prediction 46 73 - -
Gso16g0731 246 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 243 IPR040387 -
Gso16g0731 246 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 174 209 IPR008700 -
Gso16g0731 246 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 32 IPR008700 -
Gso16g0731 246 MobiDBLite consensus disorder prediction 147 162 - -
Gso16g0731 246 MobiDBLite consensus disorder prediction 91 128 - -
Gso16g0731 246 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0731 Gso-Chr16 13345628 13350625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0731 K13456 - gmx:100808509 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0731 16 13345628 13350625 Gso3g0740 3 25074908 25078814 GST
Gso16g0731 16 13345628 13350625 Gso16g0731 16 13345628 13350625 PCT
Gso16g0731 16 13345628 13350625 Gso3g0740 3 25074908 25078814 PCT
Gso3g0740 3 25074908 25078814 Gso16g0731 16 13345628 13350625 PCT