Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0669 ATGATGGGGGAAGGAGCGAGCAATGGAGGGATGCTGTACCACGAGGTGCAGGAGTCGAAGCTCTGCGCGGTGCATTGCGTGAACACGGTGCTGCAGGGCCCGTTCTTCTCGGAGTTCGATTTGGCCGCGCTCGCCTCCGATCTCGACCGCAAGGAGCGCCAGGTCATGCTCCCCGCGCTCTCCTCGGCGGATTTCGAATCGCACAATGTCTCGCTCGACGGCGATTTCAGCATCCAGGTTTTACAAAAGGCTCTGGAAGTGTGGGACCTACAAGTTATCCCTCTTGACTCTCCAGTTGCTGAGCCTGCCCAGATTGACCCTGAGCTGGAAAATGCCTTCATTTGTCATTTGCAAGACCATTGGTTTTGTATCCGTAAAGTGAACAGGGAGTGGTATAATTTTGACAGTCTCTATGCAGCCCCACAGCACCTTTCCAAGTTTTACCTCTCTGCCTATCTTGACTCTTTGAAAGGCTTTGGGTGGAGCATATTCCTGGTTAGAGGAAATTTTCCAAAAGAGTTCCCCATCTCCTCATCTGAAGCTTCTAATGGATTTGGGCAGTGGCTTTCACCCGAAGATGCTGAGAGGATAACTAAATCTTGCAACTCAGTACAGGCTCCACACCAGAGAGTTAACGAGCGCCAACAGAATTATGATCAGTTTCTTTCTCATGGGGAAACCGAAATGCTATTAGACATGGAAGATGAGGATCTAAGGGCTGCAATTGCAGCTAGTCTGATGGATTCATCCCCAGTTGTGACAAATGCTGAAGCCAGTACTCCTCAAAATGATAATCAAAGTAGTAAACAAGTGGCAACCACTGAAGCTACCCCTCTAAATGATCAACACTCCAAACAAGTGGAACCCATTGAAGCCACTCCGCCTCTCAATGCTCAAAGCAACAAACATTTGCCTGCTACTGAAGCTGGTTCTCCTCTGAATGATCAAAACAGCAAAGAAGTGGCATCTACTATAGGTGATAACGCTCAAGATGATAACCAGAAAAAATAA 1011 0.4817 MMGEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVMLPALSSADFESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNREWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPISSSEASNGFGQWLSPEDAERITKSCNSVQAPHQRVNERQQNYDQFLSHGETEMLLDMEDEDLRAAIAASLMDSSPVVTNAEASTPQNDNQSSKQVATTEATPLNDQHSKQVEPIEATPPLNAQSNKHLPATEAGSPLNDQNSKEVASTIGDNAQDDNQKK* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0669 336 SMART Josephin_2 16 169 IPR006155 GO:0004843|GO:0016579
Gso3g0669 336 MobiDBLite consensus disorder prediction 253 329 - -
Gso3g0669 336 PANTHER ATAXIN-3-RELATED 1 303 IPR033865 GO:0004843|GO:0016579
Gso3g0669 336 Gene3D - 35 73 - -
Gso3g0669 336 Pfam Josephin 17 167 IPR006155 GO:0004843|GO:0016579
Gso3g0669 336 PRINTS Josephin signature 13 36 - -
Gso3g0669 336 PRINTS Josephin signature 107 126 - -
Gso3g0669 336 PRINTS Josephin signature 128 148 - -
Gso3g0669 336 PRINTS Josephin signature 152 171 - -
Gso3g0669 336 PANTHER ATAXIN-3 1 303 - -
Gso3g0669 336 MobiDBLite consensus disorder prediction 253 336 - -
Gso3g0669 336 Gene3D - 21 171 - -
Gso3g0669 336 ProSiteProfiles Josephin domain profile. 9 181 IPR006155 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0669 Gso-Chr3 20333648 20337919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0669 K11863 - gmx:100808056 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0669 3 20333648 20337919 Gso3g0669 3 20333648 20337919 ECH
Gso1g0927 1 37463336 37468426 Gso3g0669 3 20333648 20337919 GST