Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0927 ATGATGGAAGGAGCGAGCAATGGAGGGATGCTGTACCACGAGGTGCAGGAGTCGAAGCTCTGCGCGGTGCATTGCGTGAACACGGTGCTGCAGGGCCCGTTCTTCTCGGAGTTCGATTTGGCCGCGCTTGCCTCCGATCTCGACCGCAAGGAGCGTCAGGTCATGCTCCCAGCGCTCGCGTCGGCGGATTTCGAGTCGCACAATGTCTCGCTCGACGGGGATTTCAGCATCCAGGTTTTACAAAAGGCTCTGGAAGTTTGGGACCTACAAGTTATCCCTCTTGACTCTCCAGTTGCTGAGCCTGCCCAGATTGACCCTGAGCTGGAAAATGCCTTCATTTGTCATTTACAAGACCATTGGTTTTGTATCCGCAAAGTGAATGGGGAGTGGTATAATTTTGACAGTCTCTATGCAGCCCCACAGCACCTTTCCAAGTTTTACCTCTCTGCCTATCTTGACTCTTTGAAAGGCTTTGGGTGGAGCATATTCCTGGTTAGAGGAAATTTTCCAAAAGAGTTCCCCATCTCCTCATCTGAAGCTTCTAATGGATTTGGGCAGTGGCTTTCACCCGAAGATGCTGAGAGGATAACTAAATCTTGCAACTCAGTACAGGCTCCACACCCGAGAGTTAACGAGCACCAACAGCATTACGATCAGTTTCTTTCTCATGGGGAAAATGAAATGCTATTAGACATGGAAGATGAGGATCTAAGGGCTGCAATTGCAGCTAGTCTGATGGATTCGTCCCCAGCTGTGACCAATGCTGAAGCCAGTACTCCTCAAAATGATAATCATAGTAGTAAACAAGTGGCAACCACTGAAGCTACCCCTCTAAATGATCAACACTCCAAACAAGTGGAACCCATTGAAGCCACTCCACCTGTCAATGCTCTAAGCAACAAACATGTGCCTGCTATTGAAGCTTGTTCTCTGAATGATCAAAACAGCAAAGAAGTGGCATCTACTATAGGTGATAATGCTCAAGATGAAAACCAGAATAAAGAAAAAACAGCCTAA 1017 0.4769 MMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVMLPALASADFESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPISSSEASNGFGQWLSPEDAERITKSCNSVQAPHPRVNEHQQHYDQFLSHGENEMLLDMEDEDLRAAIAASLMDSSPAVTNAEASTPQNDNHSSKQVATTEATPLNDQHSKQVEPIEATPPVNALSNKHVPAIEACSLNDQNSKEVASTIGDNAQDENQNKEKTA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0927 338 MobiDBLite consensus disorder prediction 250 338 - -
Gso1g0927 338 Gene3D - 34 72 - -
Gso1g0927 338 SMART Josephin_2 15 168 IPR006155 GO:0004843|GO:0016579
Gso1g0927 338 MobiDBLite consensus disorder prediction 250 286 - -
Gso1g0927 338 Pfam Josephin 16 166 IPR006155 GO:0004843|GO:0016579
Gso1g0927 338 MobiDBLite consensus disorder prediction 309 328 - -
Gso1g0927 338 Gene3D - 20 170 - -
Gso1g0927 338 PRINTS Josephin signature 12 35 - -
Gso1g0927 338 PRINTS Josephin signature 106 125 - -
Gso1g0927 338 PRINTS Josephin signature 127 147 - -
Gso1g0927 338 PRINTS Josephin signature 151 170 - -
Gso1g0927 338 PANTHER ATAXIN-3 2 333 - -
Gso1g0927 338 ProSiteProfiles Josephin domain profile. 8 180 IPR006155 GO:0004843|GO:0016579
Gso1g0927 338 PANTHER ATAXIN-3-RELATED 2 333 IPR033865 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0927 Gso-Chr1 37463336 37468426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0927 K11863 - gmx:100776098 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0927 1 37463336 37468426 Gso3g0669 3 20333648 20337919 GST