Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0583 ATGAAAATTGAGCTTGTCTCATCAGTGGTGGTGGTGTCATTCTATTGGATTTGGCTTTGCAACAACATCCTTGTGGTTTCTGGCCTCTGTCTTGATAATCAGAAGTCTTTGCTGCTCGAATTTAAGAACAACGTCACATTCGTAGACACGGTTGACAGAAATAGCAGCAGGCTGAATTCATGGAAAGCGAGTAATGATTGTTGCAAGTGGATGGGAGTAACCTGTGACGAGGATGGGCATGTTATCGGTCTTGATCTCAGTGGAGAACTAATCTCTGGTGGATTCGACAATTCAACTAGTCTTTTCGGTCTCCAACATCTTCAGAATCTAAATTTAGCTGCAAATTACTTCTTCTCGGAGATTCCCTCTGGATTCAACAAGTTAGAGAAATTAACTCACCTGAATCTGTCAGAGGCTTCCTTTATGGGACAGATTCCAATAGAGATCTCTCAGTTGATAAGGTTGGTTACTCTTGATATCTCTTCTCTTTCCTTCTTAAATGGGAAAAGGCTGAAACTTGAGAACCCGAATCTGCAAAAGCTTGTCCAAAATCTCACTAATATTAGGCAACTGTATCTGGATGGTGTAAGTATCTCAGTTGCAGGACATGAATGGTGCAGCGCTTTATCGTCGATGCTTGACCTGCAAGAAATTCGCATGTCCAAGTGCAATCTCTCGGGACCCCTGGATTCTTCCCTGGCAAGACTTGAGAATCTATCAGTCATTGTTCTTGATATGAACTATCTATCATCCCCAGTGCCAGAAACATTTGCCCATTTGAAAAATCTCACCATCCTACGCCTTTCTGAGTGCGGATTGACTGGGACATTTCCACAGAAGATCTTCAGCATTGAAACATTGTCTGTTATTGACATATCACTCAACCAAAATCTCAATGGTTTCTTTCCAAACTTCCCATTGAGCAGATCACTTCAGACCTTAAAAGTAAGAAACACAAGCTTTTCTGGAGCATTTCCACACTCGATTGGTATAATGAGGCACTTATCTGAATTGGATCTTTCTGATTGTCGATTTAACGGAACACTTCCCGGCTCACTGTCAAACCTTACAGAACTCAGTTACATGGACTTGTCATTTAACAACTTCACTGGTCCCATGACATCGTTTGGTATGGCCAAAAACCTTACCCATTTAGACCTTTCTCATAATGATTTAAGTGGCATAATTTCATCATCTCATTTTGAAGGACTGCAAAATCTTGTCAATATTGACTTGAGTTATAATTCTTTCACTGGGAGCATTCCTTCATCCTTGTTTCCACTTCCACTCCTACAACAGATTCAACTTTCCAACAATCAATTTAGCCAACTAGATGAATTCATAAATGTGTCTTCTTCTATATTAGACACTCTTGATTTAAGAAGCAACAATTTGTCAGGACCTTTTCCAACATCTATCTTCTATCTCAGTTCACTCTCTATCCTCCAACTTTCTTCAAACAAGTTCACTGGGTCGGTGCAGCTGAATAAGTTTTTTGAGCTTAAAAATTTAACTGCACTAGACCTTTCATATAACAGCTTATCATTGAATGAAAATTTTGATCCATCTTTCTCTTCCAAGATTAGAATTTTAAAATTAGCATCATGCAACTTGAAAACGTTCCCTGGTTTCTTGAGAAACTTGTCCACATTAGCCACTCTAGATCTTTCAAATAACCAGATTCAAGGAATGGTGCCCAACTGGATATGGAAACTAGACAATCTTAATATTTCTCACAATTTGTTGACTGGTTTTGAAGGACCTTTGCAGAATTTTACTTCCAACTTTGTTTTCCTTGACCTTCACCACAATAAACTTGAAGGGCCAATACCTGTTTTTCCTAATTATGCGGTGTATTTGGATTTCTCAAGCAACAAATTTAGCTCTTTTATCCCACATGACATTGGTAATTACCTGTCTTCCACATTTTTTCTTTCTCTTTCAAACAATACTTTGAATGGAAGTATCCCTGATTCCCTCTGCAAAGCTTCATTACTTCAAATGCTTGATCTTTCCATTAATAACTTTTCTGGAACAATTCCCTCATGTCTAATGATGATGAGTGACACTCTTGTGGTATTAAATCTGAAGAACAACAATCTCACAGGCCAAATTCCAGATACAATTCCAATTTCCTGTGGTTTGTGGACTTTAAATCTTCATAGAAATCAATTAGATGGGCCAATTCCAAAATCTCTTGCCCATTGCTCAAAGTTAGAGGTATTGGACCTTGGATCAAATCAAATTATTGGTGGCTTTCCATGCTTTTTGAAGGAAATATCCATACTTCGTATCTTGATTTTGCGAAACAATGGATTTCAAGGTTCCCTTAGATGTTCGGAAGCCAATGAGACTTGGGAAATGCTTCAAATTTTGGATGTCGCTTTTAACAATTTTAGTGGCAAATTGCCAGAAAGATATTTCACAACCTGGAAAAGAAATATAATGCATAATAAGCATGAAGTTGAAGCAAAGTTTATTGAGCGGCTTGATATCAGTTCTGGTTTATATTATCAAGGTAGTGTGACAGTTATCAGCAAAGGTCTACAAATGGAGTTGGTTAAAATTTTGACAATCTTTACATCCATCGATTTCTCATCTAACCATTTTGAAGGACCTATACCAGAAGTGTTAATGGATTTCAAAGAACTCTATATCCTTAATTTGTCAAACAATGCTTTGTCTGGTGAAATCCCATCATCGATAGGTAACCTAAGACAGCTGGAGTCTTTGGACCTTTCACAAAACGCTCTGAGTGGAGGAATTCCTATGCAGATTGCAAGTTTGTCATTCCTTTCATATTTAAACCTTTCCTTCAATCATTTGGTAGGGAAGATACCAACAGGTACCCAACTTCAGTCATTTTCAGCTTCTTCCTTTGAAGGCAATGATGGGCTATACGGTCCTCCATTGACTGAAAATCCACATGGTAAAAGGCCAGGGGTGTTGCTGCAACGAGAATGTGAAAGGCTAGTTTGTACAATTGATTGGAATTTTATCAGTGTTGAACTAGGATTAATTTTTGGCCACGGAATTGTTTTTGGTCCACTCTTGATTTGGAAGCGGTGGAGGATATGGTATTGGCAAGTTGTGCACAAAATCCTTTGTTGGATCTTCCCTCAGATGTATCTTGAATATGTAACCCACAGAGGACAAGTTTTCACAACTTTAAGGTGGTGGCACTAG 3186 0.3845 MKIELVSSVVVVSFYWIWLCNNILVVSGLCLDNQKSLLLEFKNNVTFVDTVDRNSSRLNSWKASNDCCKWMGVTCDEDGHVIGLDLSGELISGGFDNSTSLFGLQHLQNLNLAANYFFSEIPSGFNKLEKLTHLNLSEASFMGQIPIEISQLIRLVTLDISSLSFLNGKRLKLENPNLQKLVQNLTNIRQLYLDGVSISVAGHEWCSALSSMLDLQEIRMSKCNLSGPLDSSLARLENLSVIVLDMNYLSSPVPETFAHLKNLTILRLSECGLTGTFPQKIFSIETLSVIDISLNQNLNGFFPNFPLSRSLQTLKVRNTSFSGAFPHSIGIMRHLSELDLSDCRFNGTLPGSLSNLTELSYMDLSFNNFTGPMTSFGMAKNLTHLDLSHNDLSGIISSSHFEGLQNLVNIDLSYNSFTGSIPSSLFPLPLLQQIQLSNNQFSQLDEFINVSSSILDTLDLRSNNLSGPFPTSIFYLSSLSILQLSSNKFTGSVQLNKFFELKNLTALDLSYNSLSLNENFDPSFSSKIRILKLASCNLKTFPGFLRNLSTLATLDLSNNQIQGMVPNWIWKLDNLNISHNLLTGFEGPLQNFTSNFVFLDLHHNKLEGPIPVFPNYAVYLDFSSNKFSSFIPHDIGNYLSSTFFLSLSNNTLNGSIPDSLCKASLLQMLDLSINNFSGTIPSCLMMMSDTLVVLNLKNNNLTGQIPDTIPISCGLWTLNLHRNQLDGPIPKSLAHCSKLEVLDLGSNQIIGGFPCFLKEISILRILILRNNGFQGSLRCSEANETWEMLQILDVAFNNFSGKLPERYFTTWKRNIMHNKHEVEAKFIERLDISSGLYYQGSVTVISKGLQMELVKILTIFTSIDFSSNHFEGPIPEVLMDFKELYILNLSNNALSGEIPSSIGNLRQLESLDLSQNALSGGIPMQIASLSFLSYLNLSFNHLVGKIPTGTQLQSFSASSFEGNDGLYGPPLTENPHGKRPGVLLQRECERLVCTIDWNFISVELGLIFGHGIVFGPLLIWKRWRIWYWQVVHKILCWIFPQMYLEYVTHRGQVFTTLRWWH* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0583 1061 ProSiteProfiles Leucine-rich repeat profile. 381 402 IPR001611 GO:0005515
Gso3g0583 1061 SUPERFAMILY L domain-like 30 198 - -
Gso3g0583 1061 PRINTS Leucine-rich repeat signature 382 395 - -
Gso3g0583 1061 PRINTS Leucine-rich repeat signature 501 514 - -
Gso3g0583 1061 SUPERFAMILY RNI-like 201 515 - -
Gso3g0583 1061 Gene3D Ribonuclease Inhibitor 445 688 IPR032675 -
Gso3g0583 1061 Pfam Leucine rich repeat 883 942 IPR001611 GO:0005515
Gso3g0583 1061 Pfam Leucine rich repeat 381 441 IPR001611 GO:0005515
Gso3g0583 1061 Pfam Leucine rich repeat 455 514 IPR001611 GO:0005515
Gso3g0583 1061 Gene3D Ribonuclease Inhibitor 689 979 IPR032675 -
Gso3g0583 1061 Gene3D Ribonuclease Inhibitor 29 119 IPR032675 -
Gso3g0583 1061 Gene3D Ribonuclease Inhibitor 120 442 IPR032675 -
Gso3g0583 1061 SMART LRR_typ_2 428 451 IPR003591 -
Gso3g0583 1061 SMART LRR_typ_2 548 571 IPR003591 -
Gso3g0583 1061 SMART LRR_typ_2 332 355 IPR003591 -
Gso3g0583 1061 SMART LRR_typ_2 501 526 IPR003591 -
Gso3g0583 1061 SMART LRR_typ_2 260 284 IPR003591 -
Gso3g0583 1061 SMART LRR_typ_2 104 127 IPR003591 -
Gso3g0583 1061 SMART LRR_typ_2 236 259 IPR003591 -
Gso3g0583 1061 SMART LRR_typ_2 905 933 IPR003591 -
Gso3g0583 1061 SMART LRR_sd22_2 452 478 - -
Gso3g0583 1061 SMART LRR_sd22_2 379 406 - -
Gso3g0583 1061 SMART LRR_sd22_2 736 755 - -
Gso3g0583 1061 SMART LRR_sd22_2 501 522 - -
Gso3g0583 1061 SMART LRR_sd22_2 548 577 - -
Gso3g0583 1061 SMART LRR_sd22_2 905 931 - -
Gso3g0583 1061 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 375 1043 - -
Gso3g0583 1061 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 20 375 - -
Gso3g0583 1061 Pfam Leucine rich repeat N-terminal domain 32 76 IPR013210 -
Gso3g0583 1061 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 375 1043 - -
Gso3g0583 1061 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 20 375 - -
Gso3g0583 1061 SUPERFAMILY L domain-like 633 971 - -
Gso3g0583 1061 SUPERFAMILY L domain-like 454 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0583 Gso-Chr3 15901328 15904945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0583 5 1015 Receptor kinase-like Gene Family AT1G47890 36.460 4.01e-157 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0583 - - gmx:100806632 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0986 1 40266400 40270199 Gso3g0583 3 15901328 15904945 GST