Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0986 ATGAGAGCATACAAACTCTTGTGGCTTTTCTTGATACAATTCTGCTTAATAAACTATAGTGCCAACATCTTTCCAGCAAATGGTTATTTTCTTGGCCATCAGTGTTCCGTTGTCCTCCATTTGAAAAATAGCCTAATATTCAACTCTACAAAATCCAAAAAGCTTACCCTTTGGAACCAAACTGAAGATTGTTGCCAATGGCATGGGGTGACATGCAATGAGGGGCGTGTTATAGCCCTTGATCTCAGTGAGGAGTCTATCTCGGGAGGACTCGTTAATTCAAGCTCTCTTTTCAGCCTTCAATATCTACAGAGCTTGAATTTGGCTTTCAATAACTTAAGTTCGGTGATTCCTTCGGAGTTGTACAAGCTGAATAATTTGAGTTATTTGAACTTGTCTAATGCTGGATTTGAGGGGCAGATTCCAGATGAAATTTTTCACCTCAGAAGGTTAGTTACTCTTGATTTGTCTTCTTCATTTACCTCAAGTCATAGACTGAAACTTGAGAAGCCAGACATAGCAGTGTTTCAAAACCTTACAGATATCACAGAATTGTATCTAGATGGTGTAGCAATATCTGCCAAAGGACAGGAATGGGGTCATGCTTTATCTTCATCGCAGAAGCTACGTGTTTTGAGCATGTCATCATGCAATCTCTCTGGACCTATTGATTCTTCACTAGCAAAGCTTCTGCCACTCACTGTTCTAAAATTGAGCCACAACAACATGTCAAGCGCAGTGCCAGAATCCTTTGTAAATTTCTCCAATTTAGTCACACTAGAGTTAAGAAGTTGTGGCTTGAATGGTTCTTTTCCAAAAGATATATTCCAAATATCAACGTTGAAGGTCCTTGACATCTCAGACAACCAAGATCTTGGGGGTTCTTTGCCAAACTTCCCACAACATGGTTCTCTTCATCACATGAATCTTAGCTATACAAATTTCTCAGGAAAGCTTCCAGGTGCAATTTCCAATATGAAGCAGTTATCTACAATTGATCTAGCTTACTGCCAATTTAATGGAACACTTCCTAGTTCATTCTCAGAACTCAGCCAACTTGTTTATCTAGACTTGTCTTCCAATAACTTTACTGGTCCACTTCCTTCTTTTAATTTGTCCAAGAATCTCACATATTTATCCCTCTTTCATAATCATTTAAGTGGGGTGTTGCCATCCAGTCATTTTGAGGGCCTTAAAATGCTTGTCAGCATTGATTTGGGGTTTAATTTTTTCGGTGGGAGTCTTCCCTTGTCTCTTCTTAAACTCCCATATCTGCGAGAAATTAAGCTACCTTTTAATCAATTCAATGGTTCCTTGGATGAGTTTGTGATTGCCTCCCCTGTACTGGAGATGCTTGATTTAGGTAGCAATAATTTGCATGGGCCTATTCCTTTGTCCATTTTTAATCTCAGAACCCTTGGTGTCATTCAACTTAAGTCAAACAAATTTAATGGCACAATACAATTGGACATGATTCGCAGGCTGAGTAATTTAACTACGTTTTGCCTCTCACATAACAATTTGTCAGTTGATATATACACTAGAGATGGTCAGGACCTGTCACCCTTTCCAGCTCTAAGAAATCTAATGTTGGCATCTTGCAAGCTGAGAGGAATCCCCAGTTTCTTGAGAAATCAATCTTCATTACTATATGTTGACCTAGCTGACAACGAGATTGAAGGACCAATACCTTATTGGATTTGGCAAATTGAATATCTTGTTCACTTGAATCTTTCAAAAAATTTCCTGACAAAATTGGAAGGAAGTGTCTGGAACTTTAGTTCTAACCTTTTGAATGTCGATCTAAGTTCCAACCAACTGCAAGGGCCTTTTCCTTTCATTCCAACTTTTGTAAATTATTTGGACTACTCAAACAATAGATTCAACTCTGTCATTCCACTGGACATTGGAAATCGTCTCCCTTTCGTAATATGGTTGTCTCTTTCAAACAACAGTTTTCAGGGAGGAATCCACAAATCCTTTTGCAATGCTTCAAGTCTTCGCCTGCTAGATCTTTCCCAAAATAATTTTGTTGGGACAATTCCCAAGTGTTTTTCTAAGTTGAGTATCACTCTTAGGGTGTTGAAGTTAGGTGGAAACAAACTTCAAGGATATATTCCAAACACTCTGCCAACTTCATGCACTCTAAAGTTATTGGATCTAAATGACAATTTCTTGGAGGGTACCATTCCAAAATCTTTAGCCAATTGCCAGAAACTACAGGTCCTAAACCTTCGAAGAAACATGTTAAATGACAAATTTCCTTGTTTCTTAAGTAATATTTCCACCTTACGGATCATGGATTTACGGTTAAACAAACTTCACGGGTCAATTGGATGCCTAAGAAGCAGTGGTGATTGGGAAATGCTCCATATTGTTGATGTGGCCTCCAATAATTTTAGTGGTGCAATACCAGGAGCACTATTAAACAGTTGGAAAGCAATGATGCGTGACAATGTTAGACCAGAATTTGGCCACTTATTCATGGATATCATTGAGGGCTATGATCCCAAAAATTTTAAGGATTTATTGGCACATTTGGACAAAAATATTGTAGCAAAATTAGTTAAACTTGTTACAAACATATCTCGCTCTATCCTTGACCAGGGATCCTCGGATTCATATGCAGTGGATCTTTCTCGATATCAAAATTCAATTCTTATTACTAACAAAGGTCAACAAATGCAGTTGGACAGAATCCAAAGGGCCTTCACTTACGTGGATATGTCAAGCAACAATTTTGAGGGTCCAATACCTAATGAGCTAATGCAGTTCACGGCAATGATTGCACTTAACTTGTCAAATAATGCCCTCTCAGGTCATATCCCACAATCTATTGGAAATTTGAAGAATCTTGAGTCTTTAGACTTGTCAAACAATTCTTTCAATGGGGAAATTCCTACAGAGCTTGCAAGTCTATCTTTCCTTGAATATTTGAATCTCTCATATAATCACCTAGCGGGTGAAATTCCTACTGGTACTCAAATTCAATCATTTGATGCTGATTCCTTTGAAGGGAACGAAGAATTATGTGGATCTCCACTGACCCATAATTGCAGCAATGATGGGGTGCCAACACCGGAAACGCCTCATTCCCATACTGAGAGTTCAATTGATTGGAATTTATTAAGCATAGAGTTGGGATTTATCTTTGGCTTTGGAATTTTCATCCTCCCCCTTATTCTTTGGAGGAGATGGAGACTGTGGTATTCCAAACACGTAGAAGAGATGCTTCACAGAATCATCCCCCATCTTGATTTTGTGTATGAACACCAAGGAGGGCATAGATACAGAACTCTATGGTGGAGGTATTGA 3315 0.3858 MRAYKLLWLFLIQFCLINYSANIFPANGYFLGHQCSVVLHLKNSLIFNSTKSKKLTLWNQTEDCCQWHGVTCNEGRVIALDLSEESISGGLVNSSSLFSLQYLQSLNLAFNNLSSVIPSELYKLNNLSYLNLSNAGFEGQIPDEIFHLRRLVTLDLSSSFTSSHRLKLEKPDIAVFQNLTDITELYLDGVAISAKGQEWGHALSSSQKLRVLSMSSCNLSGPIDSSLAKLLPLTVLKLSHNNMSSAVPESFVNFSNLVTLELRSCGLNGSFPKDIFQISTLKVLDISDNQDLGGSLPNFPQHGSLHHMNLSYTNFSGKLPGAISNMKQLSTIDLAYCQFNGTLPSSFSELSQLVYLDLSSNNFTGPLPSFNLSKNLTYLSLFHNHLSGVLPSSHFEGLKMLVSIDLGFNFFGGSLPLSLLKLPYLREIKLPFNQFNGSLDEFVIASPVLEMLDLGSNNLHGPIPLSIFNLRTLGVIQLKSNKFNGTIQLDMIRRLSNLTTFCLSHNNLSVDIYTRDGQDLSPFPALRNLMLASCKLRGIPSFLRNQSSLLYVDLADNEIEGPIPYWIWQIEYLVHLNLSKNFLTKLEGSVWNFSSNLLNVDLSSNQLQGPFPFIPTFVNYLDYSNNRFNSVIPLDIGNRLPFVIWLSLSNNSFQGGIHKSFCNASSLRLLDLSQNNFVGTIPKCFSKLSITLRVLKLGGNKLQGYIPNTLPTSCTLKLLDLNDNFLEGTIPKSLANCQKLQVLNLRRNMLNDKFPCFLSNISTLRIMDLRLNKLHGSIGCLRSSGDWEMLHIVDVASNNFSGAIPGALLNSWKAMMRDNVRPEFGHLFMDIIEGYDPKNFKDLLAHLDKNIVAKLVKLVTNISRSILDQGSSDSYAVDLSRYQNSILITNKGQQMQLDRIQRAFTYVDMSSNNFEGPIPNELMQFTAMIALNLSNNALSGHIPQSIGNLKNLESLDLSNNSFNGEIPTELASLSFLEYLNLSYNHLAGEIPTGTQIQSFDADSFEGNEELCGSPLTHNCSNDGVPTPETPHSHTESSIDWNLLSIELGFIFGFGIFILPLILWRRWRLWYSKHVEEMLHRIIPHLDFVYEHQGGHRYRTLWWRY* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0986 1104 Gene3D Ribonuclease Inhibitor 32 200 IPR032675 -
Gso1g0986 1104 SUPERFAMILY RNI-like 520 627 - -
Gso1g0986 1104 SUPERFAMILY L domain-like 63 193 - -
Gso1g0986 1104 Gene3D Ribonuclease Inhibitor 617 1024 IPR032675 -
Gso1g0986 1104 Gene3D Ribonuclease Inhibitor 201 298 IPR032675 -
Gso1g0986 1104 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 1 1088 - -
Gso1g0986 1104 Pfam Leucine rich repeat N-terminal domain 39 73 IPR013210 -
Gso1g0986 1104 SMART LRR_typ_2 100 123 IPR003591 -
Gso1g0986 1104 SMART LRR_typ_2 350 372 IPR003591 -
Gso1g0986 1104 SMART LRR_typ_2 523 546 IPR003591 -
Gso1g0986 1104 SMART LRR_typ_2 949 972 IPR003591 -
Gso1g0986 1104 SMART LRR_typ_2 230 253 IPR003591 -
Gso1g0986 1104 SMART LRR_typ_2 973 1006 IPR003591 -
Gso1g0986 1104 SMART LRR_typ_2 124 148 IPR003591 -
Gso1g0986 1104 Gene3D Ribonuclease Inhibitor 299 398 IPR032675 -
Gso1g0986 1104 Gene3D Ribonuclease Inhibitor 399 516 IPR032675 -
Gso1g0986 1104 SUPERFAMILY RNI-like 105 569 - -
Gso1g0986 1104 Gene3D Ribonuclease Inhibitor 517 616 IPR032675 -
Gso1g0986 1104 PANTHER LRR RECEPTOR-LIKE KINASE 1 1088 - -
Gso1g0986 1104 Pfam Leucine Rich Repeat 716 737 IPR001611 GO:0005515
Gso1g0986 1104 Pfam Leucine Rich Repeat 666 688 IPR001611 GO:0005515
Gso1g0986 1104 Pfam Leucine rich repeat 931 986 IPR001611 GO:0005515
Gso1g0986 1104 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515
Gso1g0986 1104 SUPERFAMILY L domain-like 628 1016 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0986 Gso-Chr1 40266400 40270199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0986 34 1027 Receptor kinase-like Gene Family AT1G47890 33.858 1.50e-128 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0986 - - gmx:100791529 2118.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0986 1 40266400 40270199 Gso3g0583 3 15901328 15904945 GST